RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CHMP5Q9NZZ3 219 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 TAF6LQ9Y6J9 622 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 PHIPQ8WWQ0 1821 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 KLF18A0A0U1RQI7 1052 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 CPLX1O14810 134 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 RAD21O60216 631 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
CLPB-210ENST00000539148 ECE1P42892 770 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 AK2P54819 239 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 BACE1P56817 501 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 EVCP57679 992 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 INHBEP58166 350 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 ANTXR2P58335 489 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 EVX2Q03828 476 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 SEC23AQ15436 765 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 DCAF4Q8WV16 495 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 KIF2CQ99661 725 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 TMEM47Q9BQJ4 181 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 SLKQ9H2G2 1235 aaPredicted RBP11.93□□□□□ -0.5
CLPB-210ENST00000539148 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 IL17RBQ9NRM6 502 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
CLPB-210ENST00000539148 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 SNCAIPQ9Y6H5 919 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 PTPRFP10586 1907 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 MYH6P13533 1939 aa11.93□□□□□ -0.5
CLPB-210ENST00000539148 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 PARP1P09874 1014 aaKnown RBP11.92□□□□□ -0.5
CLPB-210ENST00000539148 CETPP11597 493 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 SLC1A4P43007 532 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 ZNF157P51786 506 aaPredicted RBP11.92□□□□□ -0.5
CLPB-210ENST00000539148 GTF2A2P52657 109 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 SPP2Q13103 211 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 CST9Q5W186 159 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 OTUD7BQ6GQQ9 843 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 RGMBQ6NW40 437 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 GMCL1Q96IK5 515 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
CLPB-210ENST00000539148 PNMA2Q9UL42 364 aa11.92□□□□□ -0.5
CLPB-210ENST00000539148 ISY1Q9ULR0 285 aaKnown RBP11.92□□□□□ -0.5
CLPB-210ENST00000539148 F5H6K3 240 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
CLPB-210ENST00000539148 WDR46O15213 610 aaKnown RBP11.91□□□□□ -0.5
CLPB-210ENST00000539148 NMT2O60551 498 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 FDX1P10109 184 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 GUCY1A2P33402 732 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLPB-210ENST00000539148 KLRC3Q07444 240 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 FANCBQ8NB91 859 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
CLPB-210ENST00000539148 NUP133Q8WUM0 1156 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLPB-210ENST00000539148 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 AFG3L2Q9Y4W6 797 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
CLPB-210ENST00000539148 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
CLPB-210ENST00000539148 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 TRIM75PA6NK02 468 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 BMP3P12645 472 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 CPA1P15085 419 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 APOBRQ0VD83 1088 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 IKQ13123 557 aaPredicted RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 TOB2Q14106 344 aaPredicted RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 RTN1Q16799 776 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 CCDC96Q2M329 555 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 SLFN13Q68D06 897 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 PAXIP1Q6ZW49 1069 aaPredicted RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 TRIM22Q8IYM9 498 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 LRRC47Q8N1G4 583 aaKnown RBP11.9□□□□□ -0.5
CLPB-210ENST00000539148 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 C12orf42Q96LP6 360 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
CLPB-210ENST00000539148 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms