RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 GOLGA6BA6NDN3 693 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 CDC25AP30304 524 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 GBP6Q6ZN66 633 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 SMYD4Q8IYR2 804 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 NLRP2Q9NX02 1062 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 TRIM10Q9UDY6 481 aa20.94■□□□□ 0.94
SFSWAP-207ENST00000538548 A0A087X0B3 334 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 ATP1A1P05023 1023 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 CCNI2Q6ZMN8 369 aaPredicted RBP20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 NID2Q14112 1375 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 PHKG2P15735 406 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 MMP14P50281 582 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 NR5A1Q13285 461 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 GPATCH11Q8N954 259 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 ANKRD20A12PQ8NF67 263 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 GDAP1L1Q96MZ0 367 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 CTNND2Q9UQB3 1225 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 TJP1Q07157 1748 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 ATRNO75882 1429 aa20.93■□□□□ 0.94
SFSWAP-207ENST00000538548 SHTN1A0MZ66 631 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 COPB1P53618 953 aaKnown RBP20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 EHBP1Q8NDI1 1231 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 CHP1Q99653 195 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 CAPS2Q9BXY5 557 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 APPP05067 770 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 ADD2P35612 726 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 PI16Q6UXB8 463 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 BCAS4Q8TDM0 211 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 VPS16Q9H269 839 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 SLAIN2Q9P270 581 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 FBXO3Q9UK99 471 aa20.92■□□□□ 0.94
SFSWAP-207ENST00000538548 EIF3HO15372 352 aaKnown RBP eCLIP20.91■□□□□ 0.942e-8■■□□□ 11.9
SFSWAP-207ENST00000538548 MYBL2P10244 700 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 CASP1P29466 404 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 HNRNPH1P31943 449 aaKnown RBP20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 RAPGEF4Q8WZA2 1011 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 EPSTI1Q96J88 318 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 CSB-PGBD3P0DP91 1061 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 FAM184BQ9ULE4 1060 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 SRGAP2O75044 1071 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 ZMYND10O75800 440 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 DEXIO95424 95 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 ZNF662Q6ZS27 426 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 JAKMIP2Q96AA8 810 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 CAPZA3Q96KX2 299 aa20.91■□□□□ 0.94
SFSWAP-207ENST00000538548 GRIN2DO15399 1336 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 MNAT1P51948 309 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 SF3B2Q13435 895 aaKnown RBP20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 CCDC122Q5T0U0 273 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 GSPT2Q8IYD1 628 aaKnown RBP20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 AENQ8WTP8 325 aaKnown RBP20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 CABP5Q9NP86 173 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 RWDD2AQ9UIY3 292 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 INPP5BP32019 993 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 TCP11X2Q5H9J9 407 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 IQCEQ6IPM2 695 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 KCNV1Q6PIU1 500 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 OR8K1Q8NGG5 319 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 TAB2Q9NYJ8 693 aa20.9■□□□□ 0.94
SFSWAP-207ENST00000538548 TTF1Q15361 905 aaPredicted RBP20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 SYMPKQ92797 1274 aaKnown RBP20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 TRIM75PA6NK02 468 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 GOLGA8KD6RF30 607 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 RTN1Q16799 776 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 CAGE1Q8TC20 777 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 OXER1Q8TDS5 423 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 SH3GL2Q99962 352 aa20.89■□□□□ 0.93
SFSWAP-207ENST00000538548 ATXN2Q99700 1313 aaKnown RBP20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 KCNJ18B7U540 433 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 HERVK_113P62684 666 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 KCNJ12Q14500 433 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 FBXW10Q5XX13 1052 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 CCDC70Q6NSX1 233 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 CNPY4Q8N129 248 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 DNAJC7Q99615 494 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 CXorf56Q9H5V9 222 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 ZSWIM5Q9P217 1185 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 LRP6O75581 1613 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 ANO9A1A5B4 782 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 A6NNZ2 444 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 MAP2K2P36507 400 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 GNGT1P63211 74 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 KRT83P78385 493 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 UBE3CQ15386 1083 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 TUBB8Q3ZCM7 444 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
SFSWAP-207ENST00000538548 TRPM3Q9HCF6 1732 aaPredicted RBP20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 KRT86O43790 486 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 UBXN1Q04323 297 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 PAK1Q13153 545 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 FERMT2Q96AC1 680 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 TTC26A0AVF1 554 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 MCAMP43121 646 aa20.87■□□□□ 0.93
SFSWAP-207ENST00000538548 RRAGBQ5VZM2 374 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms