RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
CIT-209ENST00000538073 WDR18Q9BV38 432 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 TMEM121BQ9BXQ6 578 aaPredicted RBP9.46□□□□□ -0.9
CIT-209ENST00000538073 AGXT2Q9BYV1 514 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 ELP3Q9H9T3 547 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
CIT-209ENST00000538073 NYAP2Q9P242 653 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 MYH4Q9Y623 1939 aa9.46□□□□□ -0.9
CIT-209ENST00000538073 PTPRFP10586 1907 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 SNPHO15079 494 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 TTLL1O95922 423 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 PYGBP11216 843 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 EEF2P13639 858 aaKnown RBP9.45□□□□□ -0.9
CIT-209ENST00000538073 CPA1P15085 419 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 GJA5P36382 358 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 ICA1Q05084 483 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 PPIL2Q13356 520 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
CIT-209ENST00000538073 DGKHQ86XP1 1220 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 CLEC10AQ8IUN9 316 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
CIT-209ENST00000538073 IL27Q8NEV9 243 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 ZKSCAN3Q9BRR0 538 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 ALDH8A1Q9H2A2 487 aaPredicted RBP9.45□□□□□ -0.9
CIT-209ENST00000538073 AS3MTQ9HBK9 375 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 KCNH4Q9UQ05 1017 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 AFG3L2Q9Y4W6 797 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 CYP46A1Q9Y6A2 500 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 ZHX2Q9Y6X8 837 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 TNKSO95271 1327 aa9.45□□□□□ -0.9
CIT-209ENST00000538073 A0A1W2PRG0 241 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 RASSF10A6NK89 507 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
CIT-209ENST00000538073 ZBTB48P10074 688 aaPredicted RBP9.44□□□□□ -0.9
CIT-209ENST00000538073 LIFRP42702 1097 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 ECE1P42892 770 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 SART3Q15020 963 aaKnown RBP9.44□□□□□ -0.9
CIT-209ENST00000538073 RGMBQ6NW40 437 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 RASAL3Q86YV0 1011 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 SPNS2Q8IVW8 549 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 OPTNQ96CV9 577 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 UBAC1Q9BSL1 405 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 UPF3BQ9BZI7 483 aaKnown RBP9.44□□□□□ -0.9
CIT-209ENST00000538073 LY9Q9HBG7 655 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 ARHGEF10LQ9HCE6 1279 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 TMX2Q9Y320 296 aa9.44□□□□□ -0.9
CIT-209ENST00000538073 LOC285556D6RIA3 1793 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 ERICH2A1L162 156 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 FAM155AB1AL88 458 aaPredicted RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 CXCL11O14625 94 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 IFIT3O14879 490 aaKnown RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 IRF6O14896 467 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SLC10A3P09131 477 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 TOP1P11387 765 aaKnown RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 BACE1P56817 501 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SPP2Q13103 211 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 TOB2Q14106 344 aaPredicted RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 WTAPQ15007 396 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 RABEP1Q15276 862 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 TMEM67Q5HYA8 995 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SH3D19Q5HYK7 790 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 ACER1Q8TDN7 264 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 C12orf42Q96LP6 360 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 KIAA1683Q9H0B3 1180 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SH2D4AQ9H788 454 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 CLIP2Q9UDT6 1046 aa9.43□□□□□ -0.9
CIT-209ENST00000538073 ABT1Q9ULW3 272 aaKnown RBP9.43□□□□□ -0.9
CIT-209ENST00000538073 A0A0G2JLL6 359 aaPredicted RBP9.42□□□□□ -0.9
CIT-209ENST00000538073 TRIM75PA6NK02 468 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 C19orf81C9J6K1 198 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 NEK4P51957 841 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 USP14P54578 494 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 EVCP57679 992 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 MTMR2Q13614 643 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 IFIT1BQ5T764 474 aaKnown RBP9.42□□□□□ -0.9
CIT-209ENST00000538073 Q6ZUG5 572 aa9.42□□□□□ -0.9
CIT-209ENST00000538073 PRRT2Q7Z6L0 340 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms