RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-215ENST00000537296 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 NACAP1Q9BZK3 213 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 PLXNB2O15031 1838 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
LDHA-215ENST00000537296 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
LDHA-215ENST00000537296 EEF2P13639 858 aaKnown RBP12.93□□□□□ -0.34
LDHA-215ENST00000537296 SOX10P56693 466 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.34
LDHA-215ENST00000537296 KIF22Q14807 665 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 SPICE1Q8N0Z3 855 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 GABRQQ9UN88 632 aa12.93□□□□□ -0.34
LDHA-215ENST00000537296 CCDC171Q6TFL3 1326 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 HSPD1P10809 573 aaKnown RBP12.92□□□□□ -0.34
LDHA-215ENST00000537296 USP14P54578 494 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 PRKCZQ05513 592 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 FAM110CQ1W6H9 321 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 FAM47AQ5JRC9 791 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 NKX2-3Q8TAU0 364 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
LDHA-215ENST00000537296 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
LDHA-215ENST00000537296 LAMA4Q16363 1823 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 A0A0G2JMZ2 1700 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 FGAP02671 866 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
LDHA-215ENST00000537296 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
LDHA-215ENST00000537296 FCGRTP55899 365 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 Q3C1V9 767 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 SH3TC2Q8TF17 1288 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 DIAPH3Q9NSV4 1193 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
LDHA-215ENST00000537296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
LDHA-215ENST00000537296 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
LDHA-215ENST00000537296 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 CNMDO75829 334 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
LDHA-215ENST00000537296 PYGBP11216 843 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.34
LDHA-215ENST00000537296 HAND2P61296 217 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 TICAM2Q86XR7 235 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 MORF4L1Q9UBU8 362 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
LDHA-215ENST00000537296 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.35
LDHA-215ENST00000537296 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
LDHA-215ENST00000537296 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
LDHA-215ENST00000537296 ARHGEF6Q15052 776 aa12.89□□□□□ -0.35
LDHA-215ENST00000537296 ALX1Q15699 326 aa12.89□□□□□ -0.35
LDHA-215ENST00000537296 ZNF444Q8N0Y2 327 aaPredicted RBP12.89□□□□□ -0.35
LDHA-215ENST00000537296 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
LDHA-215ENST00000537296 PORCNQ9H237 461 aa12.89□□□□□ -0.35
LDHA-215ENST00000537296 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
LDHA-215ENST00000537296 RAD21O60216 631 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 NMT2O60551 498 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 GNRH1P01148 92 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 ERVK-24P63145 666 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 TFAP4Q01664 338 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 PDE4BQ07343 736 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
LDHA-215ENST00000537296 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 CLIP2Q9UDT6 1046 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
LDHA-215ENST00000537296 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
LDHA-215ENST00000537296 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 FLT3LGP49771 235 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
LDHA-215ENST00000537296 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
LDHA-215ENST00000537296 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
LDHA-215ENST00000537296 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
LDHA-215ENST00000537296 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
LDHA-215ENST00000537296 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 1383 ms