RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 BTBD7Q9P203 1132 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 MYH8P13535 1937 aa17.13■□□□□ 0.33
RTN3P1-201ENST00000536295 PLXNB2O15031 1838 aa17.12■□□□□ 0.33
RTN3P1-201ENST00000536295 APPP05067 770 aa17.12■□□□□ 0.33
RTN3P1-201ENST00000536295 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
RTN3P1-201ENST00000536295 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
RTN3P1-201ENST00000536295 DPF3Q92784 378 aa17.12■□□□□ 0.33
RTN3P1-201ENST00000536295 RAD21O60216 631 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 EEF2P13639 858 aaKnown RBP17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 RGS2P41220 211 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 TDO2P48775 406 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 COG2Q14746 738 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 MORN1Q5T089 497 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 HMX1Q9NP08 348 aaPredicted RBP17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
RTN3P1-201ENST00000536295 XRCC5P13010 732 aaKnown RBP17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 GNAT2P19087 354 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 CCL14Q16627 93 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 LPAR1Q92633 364 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 USP6NLQ92738 828 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 KANSL2Q9H9L4 492 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 RPTORQ8N122 1335 aa17.1■□□□□ 0.33
RTN3P1-201ENST00000536295 H0YGN5 161 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 FLOT1O75955 427 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 MAP2K5Q13163 448 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 APBA2Q99767 749 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 IVNS1ABPQ9Y6Y0 642 aa17.09■□□□□ 0.33
RTN3P1-201ENST00000536295 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 PATL2C9JE40 543 aaKnown RBP17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 SLC34A2O95436 690 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 RASA1P20936 1047 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 PTPREP23469 700 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 DSG3P32926 999 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 PLS1Q14651 629 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
RTN3P1-201ENST00000536295 SLC15A5A6NIM6 579 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 WDR46O15213 610 aaKnown RBP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 PRDM1O75626 825 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 ZMYM1Q5SVZ6 1142 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 MAP3K21Q5TCX8 1036 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 MOV10L1Q9BXT6 1211 aaKnown RBP17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 SPATC1LQ9H0A9 340 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
RTN3P1-201ENST00000536295 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
RTN3P1-201ENST00000536295 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
RTN3P1-201ENST00000536295 FLRT1Q9NZU1 646 aa17.06■□□□□ 0.32
RTN3P1-201ENST00000536295 CAPN2P17655 700 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 ERCC3P19447 782 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 CCND3P30281 292 aaPredicted RBP17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 PDE1AP54750 535 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 GRB14Q14449 540 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 NAPBQ9H115 298 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 FBXO28Q9NVF7 368 aa17.05■□□□□ 0.32
RTN3P1-201ENST00000536295 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 MFSD14CQ5VZR4 134 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 NECAB2Q7Z6G3 386 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 CLIP2Q9UDT6 1046 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 RLFQ13129 1914 aa17.04■□□□□ 0.32
RTN3P1-201ENST00000536295 ADORA2AP29274 412 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 PPARAQ07869 468 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
RTN3P1-201ENST00000536295 SHCBP1Q8NEM2 672 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms