RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZHX2Q9Y6X8 837 aa18.99■□□□□ 0.63
VAMP1-205ENST00000535927 SLURP2P0DP57 97 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 CPA1P15085 419 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 SMARCA1P28370 1054 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 KIF5BP33176 963 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 BACE1P56817 501 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 SH3D19Q5HYK7 790 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 SIAH1Q8IUQ4 282 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 PNMA1Q8ND90 353 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 LZTS2Q9BRK4 669 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 TLL2Q9Y6L7 1015 aa18.98■□□□□ 0.63
VAMP1-205ENST00000535927 ZBTB43O43298 467 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 NMT2O60551 498 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 HUNKP57058 714 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 JAG1P78504 1218 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 BECN1Q14457 450 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
VAMP1-205ENST00000535927 APOA5Q6Q788 366 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 USP17L2Q6R6M4 530 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 DCAF4Q8WV16 495 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 GMCL1Q96IK5 515 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 C12orf42Q96LP6 360 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 VCPKMTQ9H867 229 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 RBM28Q9NW13 759 aaKnown RBP18.97■□□□□ 0.63
VAMP1-205ENST00000535927 OTOFQ9HC10 1997 aa18.97■□□□□ 0.63
VAMP1-205ENST00000535927 NID2Q14112 1375 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 PHIPQ8WWQ0 1821 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 SNHG28P0DPA3 235 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 TROAPQ12815 778 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 FASTKD5Q7L8L6 764 aaKnown RBP18.96■□□□□ 0.63
VAMP1-205ENST00000535927 ZNF654Q8IZM8 581 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
VAMP1-205ENST00000535927 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 F5H6K3 240 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 PLA2G6O60733 806 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 PDIA3P30101 505 aaKnown RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 ANP32AP39687 249 aaKnown RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 INHBEP58166 350 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 ATP2B2Q01814 1243 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 KLRC3Q07444 240 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 SPP2Q13103 211 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 ASPRV1Q53RT3 343 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 RGMBQ6NW40 437 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 HSCBQ8IWL3 235 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 REM2Q8IYK8 340 aaPredicted RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 FANCBQ8NB91 859 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 CTCFLQ8NI51 663 aaPredicted RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 FEZ1Q99689 392 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 LRRC2Q9BYS8 371 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 SLKQ9H2G2 1235 aaPredicted RBP18.95■□□□□ 0.62
VAMP1-205ENST00000535927 ELP3Q9H9T3 547 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 PRDM10Q9NQV6 1147 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 TMOD4Q9NZQ9 345 aa18.95■□□□□ 0.62
VAMP1-205ENST00000535927 FOXN1O15353 648 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 PFKFB2O60825 505 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 GTF2A2P52657 109 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
VAMP1-205ENST00000535927 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 SNAPC2Q13487 334 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 SLFN13Q68D06 897 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 MOB2Q70IA6 237 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
VAMP1-205ENST00000535927 A0A1W2PRG0 241 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 WDR46O15213 610 aaKnown RBP18.93■□□□□ 0.62
VAMP1-205ENST00000535927 PARP1P09874 1014 aaKnown RBP18.93■□□□□ 0.62
VAMP1-205ENST00000535927 FDX1P10109 184 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 CTCFP49711 727 aaPredicted RBP18.93■□□□□ 0.62
VAMP1-205ENST00000535927 COL9A3Q14050 684 aaPredicted RBP18.93■□□□□ 0.62
VAMP1-205ENST00000535927 GRM4Q14833 912 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 WNK4Q96J92 1243 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 CLMNQ96JQ2 1002 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 RBM27Q9P2N5 1060 aaKnown RBP18.93■□□□□ 0.62
VAMP1-205ENST00000535927 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 TPCN1Q9ULQ1 816 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 FZD1Q9UP38 647 aa18.93■□□□□ 0.62
VAMP1-205ENST00000535927 A0A0G2JLL6 359 aaPredicted RBP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 K7ELQ4 463 aaPredicted RBP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 CDKL5O76039 1030 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 PDHBP11177 359 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 CETPP11597 493 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 SLC1A4P43007 532 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 METAP2P50579 478 aaKnown RBP eCLIP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 ZNF157P51786 506 aaPredicted RBP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 PABPC4Q13310 644 aaKnown RBP eCLIP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 SPRYD7Q5W111 196 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 PRRT2Q7Z6L0 340 aaPredicted RBP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 ACER1Q8TDN7 264 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 CHURC1Q8WUH1 139 aa18.92■□□□□ 0.62
VAMP1-205ENST00000535927 LLPHQ9BRT6 129 aaKnown RBP18.92■□□□□ 0.62
VAMP1-205ENST00000535927 PALM3A6NDB9 673 aaPredicted RBP18.91■□□□□ 0.62
VAMP1-205ENST00000535927 IRF6O14896 467 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 NDUFB10O96000 172 aa18.91■□□□□ 0.62
VAMP1-205ENST00000535927 BMP3P12645 472 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms