RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 KIAA1683Q9H0B3 1180 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
CNN1-202ENST00000535659 RASSF10A6NK89 507 aa18.27■□□□□ 0.51
CNN1-202ENST00000535659 ZBTB48P10074 688 aaPredicted RBP18.27■□□□□ 0.51
CNN1-202ENST00000535659 FEZ1Q99689 392 aa18.27■□□□□ 0.51
CNN1-202ENST00000535659 F5H6K3 240 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 USP14P54578 494 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 KLRC3Q07444 240 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 MTMR2Q13614 643 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 NFXL1Q6ZNB6 911 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 RASAL3Q86YV0 1011 aa18.26■□□□□ 0.51
CNN1-202ENST00000535659 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
CNN1-202ENST00000535659 CCDC69A6NI79 296 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 SLC10A3P09131 477 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
CNN1-202ENST00000535659 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 PAXIP1Q6ZW49 1069 aaPredicted RBP18.25■□□□□ 0.51
CNN1-202ENST00000535659 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 BRF1Q92994 677 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 GOPCQ9HD26 462 aa18.25■□□□□ 0.51
CNN1-202ENST00000535659 FAM155AB1AL88 458 aaPredicted RBP18.24■□□□□ 0.51
CNN1-202ENST00000535659 GTF2A2P52657 109 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 HMGCS2P54868 508 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
CNN1-202ENST00000535659 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 ZYXQ15942 572 aaKnown RBP18.24■□□□□ 0.51
CNN1-202ENST00000535659 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 PHIPQ8WWQ0 1821 aa18.24■□□□□ 0.51
CNN1-202ENST00000535659 A0A0G2JLL6 359 aaPredicted RBP18.23■□□□□ 0.51
CNN1-202ENST00000535659 RAD21O60216 631 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 AK2P54819 239 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 SYNE3Q6ZMZ3 975 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 PRRT2Q7Z6L0 340 aaPredicted RBP18.23■□□□□ 0.51
CNN1-202ENST00000535659 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 MS4A4AQ96JQ5 239 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 TMOD4Q9NZQ9 345 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 SLC12A7Q9Y666 1083 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 ST18O60284 1047 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 CAPN15O75808 1086 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 CETPP11597 493 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 EVCP57679 992 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 APOBRQ0VD83 1088 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 FASTKD5Q7L8L6 764 aaKnown RBP18.23■□□□□ 0.51
CNN1-202ENST00000535659 LPAR1Q92633 364 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 C12orf42Q96LP6 360 aa18.23■□□□□ 0.51
CNN1-202ENST00000535659 PCNTO95613 3336 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 NDUFB10O96000 172 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 TROAPQ12815 778 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 GRM1Q13255 1194 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 DGKZQ13574 1117 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 ZNF654Q8IZM8 581 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 TNS4Q8IZW8 715 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 SPICE1Q8N0Z3 855 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
CNN1-202ENST00000535659 CAPNS2Q96L46 248 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 LARP6Q9BRS8 491 aaKnown RBP18.22■□□□□ 0.51
CNN1-202ENST00000535659 MTMR7Q9Y216 660 aa18.22■□□□□ 0.51
CNN1-202ENST00000535659 MANSC4A6NHS7 340 aaPredicted RBP18.21■□□□□ 0.51
CNN1-202ENST00000535659 INHBEP58166 350 aa18.21■□□□□ 0.51
CNN1-202ENST00000535659 APOA5Q6Q788 366 aa18.21■□□□□ 0.51
CNN1-202ENST00000535659 ZNF274Q96GC6 653 aaPredicted RBP18.21■□□□□ 0.51
CNN1-202ENST00000535659 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
CNN1-202ENST00000535659 CCL15-CCL14A0A0B4J2E2 113 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 TESPA1A2RU30 521 aaPredicted RBP18.2■□□□□ 0.5
CNN1-202ENST00000535659 ZBTB43O43298 467 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 DDAH1O94760 285 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 CALM1P0DP23 149 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 CALM2P0DP24 149 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 CALM3P0DP25 149 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 PDHBP11177 359 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 SLC1A4P43007 532 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 NOGQ13253 232 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 MOGSQ13724 837 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 CCL15Q16663 113 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 GADL1Q6ZQY3 521 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 NUP133Q8WUM0 1156 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 CHMP4CQ96CF2 233 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 MAP3K14Q99558 947 aa18.2■□□□□ 0.5
CNN1-202ENST00000535659 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
CNN1-202ENST00000535659 BMP3P12645 472 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 VCAM1P19320 739 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 PDIA3P30101 505 aaKnown RBP18.19■□□□□ 0.5
CNN1-202ENST00000535659 FANCBQ8NB91 859 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 MYL10Q9BUA6 226 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms