RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SYNPO2Q9UMS6 1093 aa28.53■■■□□ 2.16
SIPA1-210ENST00000534406 TBC1D8O95759 1140 aa28.52■■■□□ 2.16
SIPA1-210ENST00000534406 HSPA8P11142 646 aaKnown RBP28.52■■■□□ 2.16
SIPA1-210ENST00000534406 IQCA1Q86XH1 822 aa28.52■■■□□ 2.16
SIPA1-210ENST00000534406 NKX2-3Q8TAU0 364 aa28.52■■■□□ 2.16
SIPA1-210ENST00000534406 STX8Q9UNK0 236 aa28.52■■■□□ 2.16
SIPA1-210ENST00000534406 STOX1Q6ZVD7 989 aa28.51■■■□□ 2.15
SIPA1-210ENST00000534406 LRRC47Q8N1G4 583 aaKnown RBP28.51■■■□□ 2.15
SIPA1-210ENST00000534406 NCOA7Q8NI08 942 aa28.51■■■□□ 2.15
SIPA1-210ENST00000534406 MKL1Q969V6 931 aa28.51■■■□□ 2.15
SIPA1-210ENST00000534406 EPB41L2O43491 1005 aaKnown RBP28.5■■■□□ 2.15
SIPA1-210ENST00000534406 OSBPP22059 807 aa28.5■■■□□ 2.15
SIPA1-210ENST00000534406 HOXA7P31268 230 aaPredicted RBP28.5■■■□□ 2.15
SIPA1-210ENST00000534406 IRX3P78415 501 aaPredicted RBP28.5■■■□□ 2.15
SIPA1-210ENST00000534406 RAD21O60216 631 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 CYP2C8P10632 490 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 NOVP48745 357 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 CCDC178Q5BJE1 867 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 KIAA1755Q5JYT7 1200 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 SPICE1Q8N0Z3 855 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 UBAC1Q9BSL1 405 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 ASCC2Q9H1I8 757 aaPredicted RBP28.49■■■□□ 2.15
SIPA1-210ENST00000534406 R3HDMLQ9H3Y0 253 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 RPAP3Q9H6T3 665 aaPredicted RBP28.49■■■□□ 2.15
SIPA1-210ENST00000534406 ZSWIM5Q9P217 1185 aa28.49■■■□□ 2.15
SIPA1-210ENST00000534406 ADGRA2Q96PE1 1338 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L15C9J2P7 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L13C9JLJ4 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L11C9JVI0 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L18D6R9N7 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L22D6RA61 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L17D6RBQ6 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L19D6RCP7 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L20D6RJB6 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 WDR46O15213 610 aaKnown RBP28.48■■■□□ 2.15
SIPA1-210ENST00000534406 USP17L24Q0WX57 530 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 SMCR8Q8TEV9 937 aaPredicted RBP28.48■■■□□ 2.15
SIPA1-210ENST00000534406 ZKSCAN3Q9BRR0 538 aa28.48■■■□□ 2.15
SIPA1-210ENST00000534406 TLR2O60603 784 aa28.47■■■□□ 2.15
SIPA1-210ENST00000534406 EIF5BO60841 1220 aaKnown RBP28.47■■■□□ 2.15
SIPA1-210ENST00000534406 NDUFB10O96000 172 aa28.47■■■□□ 2.15
SIPA1-210ENST00000534406 ZKSCAN1P17029 563 aaPredicted RBP28.47■■■□□ 2.15
SIPA1-210ENST00000534406 NOM1Q5C9Z4 860 aaKnown RBP28.47■■■□□ 2.15
SIPA1-210ENST00000534406 GMCL1P1Q8NEA9 526 aa28.47■■■□□ 2.15
SIPA1-210ENST00000534406 TANGO6Q9C0B7 1094 aa28.47■■■□□ 2.15
SIPA1-210ENST00000534406 TNKSO95271 1327 aa28.46■■■□□ 2.15
SIPA1-210ENST00000534406 TOP1P11387 765 aaKnown RBP28.46■■■□□ 2.15
SIPA1-210ENST00000534406 CYB5R4Q7L1T6 521 aa28.46■■■□□ 2.15
SIPA1-210ENST00000534406 TTC14Q96N46 770 aa28.46■■■□□ 2.15
SIPA1-210ENST00000534406 ZSCAN10Q96SZ4 725 aaPredicted RBP28.46■■■□□ 2.15
SIPA1-210ENST00000534406 F5H6K3 240 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 GPR25O00155 361 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 HSPA4P34932 840 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 LBX1P52954 281 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 KLRC3Q07444 240 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 CATSPERGQ6ZRH7 1159 aa28.45■■■□□ 2.14
SIPA1-210ENST00000534406 MB21D2Q8IYB1 491 aaPredicted RBP28.45■■■□□ 2.14
SIPA1-210ENST00000534406 KRT32Q14532 448 aa28.44■■■□□ 2.14
SIPA1-210ENST00000534406 RCSD1Q6JBY9 416 aa28.44■■■□□ 2.14
SIPA1-210ENST00000534406 DGKHQ86XP1 1220 aa28.44■■■□□ 2.14
SIPA1-210ENST00000534406 ENAHQ8N8S7 591 aaPredicted RBP28.44■■■□□ 2.14
SIPA1-210ENST00000534406 TMEM47Q9BQJ4 181 aa28.44■■■□□ 2.14
SIPA1-210ENST00000534406 PARP14Q460N5 1801 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 TSGA10IPQ3SY00 556 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 FAM83BQ5T0W9 1011 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 SLFN13Q68D06 897 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 RASEFQ8IZ41 740 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 USP26Q9BXU7 913 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 CPA4Q9UI42 421 aa28.43■■■□□ 2.14
SIPA1-210ENST00000534406 MCCP23508 829 aa28.42■■■□□ 2.14
SIPA1-210ENST00000534406 GCLCP48506 637 aaPredicted RBP28.42■■■□□ 2.14
SIPA1-210ENST00000534406 HERVK_113P62684 666 aa28.42■■■□□ 2.14
SIPA1-210ENST00000534406 SART3Q15020 963 aaKnown RBP28.42■■■□□ 2.14
SIPA1-210ENST00000534406 GTF3C2Q8WUA4 911 aaPredicted RBP28.42■■■□□ 2.14
SIPA1-210ENST00000534406 KCNB2Q92953 911 aa28.42■■■□□ 2.14
SIPA1-210ENST00000534406 NUP88Q99567 741 aaPredicted RBP28.42■■■□□ 2.14
SIPA1-210ENST00000534406 CASP8AP2Q9UKL3 1982 aa28.42■■■□□ 2.14
SIPA1-210ENST00000534406 C8orf34Q49A92 452 aa28.41■■■□□ 2.14
SIPA1-210ENST00000534406 C17orf99Q6UX52 265 aa28.41■■■□□ 2.14
SIPA1-210ENST00000534406 GMCL1Q96IK5 515 aa28.41■■■□□ 2.14
SIPA1-210ENST00000534406 P2RX7Q99572 595 aaKnown RBP28.41■■■□□ 2.14
SIPA1-210ENST00000534406 RLFQ13129 1914 aa28.41■■■□□ 2.14
SIPA1-210ENST00000534406 ERICH2A1L162 156 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 IFIT3O14879 490 aaKnown RBP28.4■■■□□ 2.14
SIPA1-210ENST00000534406 FKTNO75072 461 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 FLOT1O75955 427 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 MCM5P33992 734 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 ANTXR2P58335 489 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 IFIT1BQ5T764 474 aaKnown RBP28.4■■■□□ 2.14
SIPA1-210ENST00000534406 ZNF296Q8WUU4 475 aaPredicted RBP28.4■■■□□ 2.14
SIPA1-210ENST00000534406 ANKS1AQ92625 1134 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 PRDM10Q9NQV6 1147 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 A0A0G2JMZ2 1700 aa28.4■■■□□ 2.14
SIPA1-210ENST00000534406 BCRP11274 1271 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 SEC23AQ15436 765 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 CHST3Q7LGC8 479 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 NEK1Q96PY6 1258 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 KAT14Q9H8E8 782 aa28.39■■■□□ 2.14
SIPA1-210ENST00000534406 ISY1Q9ULR0 285 aaKnown RBP28.39■■■□□ 2.14
SIPA1-210ENST00000534406 MTMR7Q9Y216 660 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms