RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 BICRAQ9NZM4 1560 aa6.56□□□□□ -1.36
ITGB1-219ENST00000534049 SLC22A31A6NKX4 558 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-219ENST00000534049 SEZ6Q53EL9 994 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 BAHD1Q8TBE0 780 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-219ENST00000534049 NKD1Q969G9 470 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 RNF34Q969K3 372 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 KIF2CQ99661 725 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 KRTAP4-12Q9BQ66 201 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 TMEM59LQ9UK28 342 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 CARMIL2Q6F5E8 1435 aa6.55□□□□□ -1.36
ITGB1-219ENST00000534049 MEIS3P2A8K0S8 358 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 SCAMP3O14828 347 aaKnown RBP6.54□□□□□ -1.36
ITGB1-219ENST00000534049 ESR1P03372 595 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 MCM4P33991 863 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 CRKP46108 304 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 FANCCQ00597 558 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 CLEC16AQ2KHT3 1053 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 ARSHQ5FYA8 562 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 USP48Q86UV5 1035 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 DHX38Q92620 1227 aaKnown RBP6.54□□□□□ -1.36
ITGB1-219ENST00000534049 KIRREL1Q96J84 757 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 UBP1Q9NZI7 540 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
ITGB1-219ENST00000534049 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 DNAJA2O60884 412 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 FARP2O94887 1054 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-219ENST00000534049 GLI1P08151 1106 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 LTKP29376 864 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 LDLRAD1Q5T700 205 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 OVOS1Q6IE37 1185 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 NLRC3Q7RTR2 1065 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
ITGB1-219ENST00000534049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-219ENST00000534049 DCAF1Q9Y4B6 1507 aa6.52□□□□□ -1.37
ITGB1-219ENST00000534049 EGR3Q06889 387 aa6.52□□□□□ -1.37
ITGB1-219ENST00000534049 TMEM67Q5HYA8 995 aa6.52□□□□□ -1.37
ITGB1-219ENST00000534049 GK5Q6ZS86 529 aa6.52□□□□□ -1.37
ITGB1-219ENST00000534049 TTC6Q86TZ1 520 aa6.52□□□□□ -1.37
ITGB1-219ENST00000534049 CLEC3AO75596 197 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 UBOX5O94941 541 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 DUSP4Q13115 394 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-219ENST00000534049 PKN1Q16512 942 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 OXR1Q8N573 874 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 PDZD8Q8NEN9 1154 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-219ENST00000534049 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-219ENST00000534049 VWCEQ96DN2 955 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 ATG4CQ96DT6 458 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 SLC38A3Q99624 504 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 C19orf73Q9NVV2 129 aa6.51□□□□□ -1.37
ITGB1-219ENST00000534049 LRRC10BA6NIK2 292 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 TNFRSF10CO14798 259 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 ENDOUP21128 410 aaKnown RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 CHRNEQ04844 493 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 CLCQ05315 142 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 INTS3Q68E01 1043 aaKnown RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 MPZL3Q6UWV2 235 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 RNF111Q6ZNA4 994 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 LILRA2Q8N149 483 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 TAB3Q8N5C8 712 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 ZNF655Q8N720 491 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 DAGLBQ8NCG7 672 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 MYLIPQ8WY64 445 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
ITGB1-219ENST00000534049 DHRS1Q96LJ7 313 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 ZNRF3Q9ULT6 936 aa6.5□□□□□ -1.37
ITGB1-219ENST00000534049 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 FITM1A5D6W6 292 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 RECKO95980 971 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 HPXP02790 462 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 NBPF12Q5TAG4 269 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-219ENST00000534049 SPPL2CQ8IUH8 684 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 KSR1Q8IVT5 923 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 ZNF654Q8IZM8 581 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 ABHD4Q8TB40 342 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 FAM84AQ96KN4 292 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 PPP1R16BQ96T49 567 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 PCDHA11Q9Y5I1 949 aa6.49□□□□□ -1.37
ITGB1-219ENST00000534049 SHROOM4Q9ULL8 1493 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 LRRN2O75325 713 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 C8AP07357 584 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 NR0B2Q15466 257 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 RALGPS1Q5JS13 557 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 ANKS4BQ8N8V4 417 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 TM9SF2Q99805 663 aa6.48□□□□□ -1.37
ITGB1-219ENST00000534049 DDX41Q9UJV9 622 aaKnown RBP6.48□□□□□ -1.37
ITGB1-219ENST00000534049 ZNF503-AS2A6NEH8 195 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 HK2P52789 917 aa6.47□□□□□ -1.37
ITGB1-219ENST00000534049 PCBP3P57721 371 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms