RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 NMT2O60551 498 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 ALDH1A1P00352 501 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
CMTM1-218ENST00000533915 WTAPQ15007 396 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
CMTM1-218ENST00000533915 ZCCHC17Q9NP64 241 aaKnown RBP16.53■□□□□ 0.24
CMTM1-218ENST00000533915 NOVP48745 357 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 ZYXQ15942 572 aaKnown RBP16.52■□□□□ 0.24
CMTM1-218ENST00000533915 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 CLEC10AQ8IUN9 316 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 SIAH1Q8IUQ4 282 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
CMTM1-218ENST00000533915 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 C12orf42Q96LP6 360 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
CMTM1-218ENST00000533915 PTPRFP10586 1907 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 A0A1W2PRG0 241 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 F5H6K3 240 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 AOC2O75106 756 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 RPS6KB1P23443 525 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 TM4SF4P48230 202 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
CMTM1-218ENST00000533915 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
CMTM1-218ENST00000533915 KLRC3Q07444 240 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 RUFY3Q7L099 469 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 CHST3Q7LGC8 479 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 CATIPQ7Z7H3 387 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 ANKRD23Q86SG2 305 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 TMEM47Q9BQJ4 181 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 BEGAINQ9BUH8 593 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
CMTM1-218ENST00000533915 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
CMTM1-218ENST00000533915 OSBPP22059 807 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 LIFRP42702 1097 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
CMTM1-218ENST00000533915 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
CMTM1-218ENST00000533915 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 EMILIN3Q9NT22 766 aa16.5■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L15C9J2P7 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L13C9JLJ4 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L11C9JVI0 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L18D6R9N7 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L22D6RA61 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L17D6RBQ6 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L19D6RCP7 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L20D6RJB6 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-218ENST00000533915 SLC1A4P43007 532 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 ANTXR2P58335 489 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-218ENST00000533915 USP17L24Q0WX57 530 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 SEC23AQ15436 765 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 RCSD1Q6JBY9 416 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 IFNL1Q8IU54 200 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 GMCL1Q96IK5 515 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
CMTM1-218ENST00000533915 CEP350Q5VT06 3117 aa16.49■□□□□ 0.23
CMTM1-218ENST00000533915 PDHXO00330 501 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 NDUFB10O96000 172 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 CALM1P0DP23 149 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 CALM2P0DP24 149 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 CALM3P0DP25 149 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 VCAM1P19320 739 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
CMTM1-218ENST00000533915 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 DNAJC5GQ8N7S2 189 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 PARK7Q99497 189 aaKnown RBP16.48■□□□□ 0.23
CMTM1-218ENST00000533915 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
CMTM1-218ENST00000533915 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 CA12O43570 354 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 BMP3P12645 472 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 MOGSQ13724 837 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
CMTM1-218ENST00000533915 Q6ZUG5 572 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
CMTM1-218ENST00000533915 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-218ENST00000533915 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
CMTM1-218ENST00000533915 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
CMTM1-218ENST00000533915 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms