RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
PACS1-213ENST00000533756 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
PACS1-213ENST00000533756 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
PACS1-213ENST00000533756 IRF2BPLQ9H1B7 796 aa11.24□□□□□ -0.61
PACS1-213ENST00000533756 PGK1P00558 417 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 ADORA2AP29274 412 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 TCF15Q12870 199 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 G2E3Q7L622 706 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 BMP8AQ7Z5Y6 402 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.23□□□□□ -0.61
PACS1-213ENST00000533756 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
PACS1-213ENST00000533756 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
PACS1-213ENST00000533756 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
PACS1-213ENST00000533756 ELP1O95163 1332 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 SALL1Q9NSC2 1324 aa11.23□□□□□ -0.61
PACS1-213ENST00000533756 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L22D6RA61 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L17D6RBQ6 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L19D6RCP7 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L20D6RJB6 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 ADAMTS4O75173 837 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 CA3P07451 260 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 IL9P15248 144 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
PACS1-213ENST00000533756 ID4P47928 161 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L24Q0WX57 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 GRB10Q13322 594 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 UPF3BQ9BZI7 483 aaKnown RBP11.22□□□□□ -0.61
PACS1-213ENST00000533756 PPP1R12CQ9BZL4 782 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 CERS4Q9HA82 394 aa11.22□□□□□ -0.61
PACS1-213ENST00000533756 ROBO3Q96MS0 1386 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
PACS1-213ENST00000533756 FGFR2P21802 821 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 CYP2C18P33260 490 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
PACS1-213ENST00000533756 IER5LQ5T953 404 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
PACS1-213ENST00000533756 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
PACS1-213ENST00000533756 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 C12orf42Q96LP6 360 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 GLT1D1Q96MS3 346 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 BTBD7Q9P203 1132 aa11.21□□□□□ -0.61
PACS1-213ENST00000533756 ATAD5Q96QE3 1844 aa11.21□□□□□ -0.62
PACS1-213ENST00000533756 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.62
PACS1-213ENST00000533756 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.62
PACS1-213ENST00000533756 ARVCFO00192 962 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 LPXNO60711 386 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 COBLO75128 1261 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 MAP4K4O95819 1239 aaPredicted RBP11.2□□□□□ -0.62
PACS1-213ENST00000533756 FLIIQ13045 1269 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
PACS1-213ENST00000533756 LRRC24Q50LG9 513 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 CCSAPQ6IQ19 270 aaPredicted RBP11.2□□□□□ -0.62
PACS1-213ENST00000533756 FAM126BQ8IXS8 530 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 ABRAQ8N0Z2 381 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
PACS1-213ENST00000533756 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 KLHDC9Q8NEP7 349 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 PRKAG3Q9UGI9 489 aa11.2□□□□□ -0.62
PACS1-213ENST00000533756 ZNF536O15090 1300 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 GRM8O00222 908 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 CD4P01730 458 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 AKR1A1P14550 325 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 KCNA5P22460 613 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 BTDP43251 543 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 TAP1Q03518 808 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
PACS1-213ENST00000533756 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
PACS1-213ENST00000533756 KCNA10Q16322 511 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 DCHS1Q96JQ0 3298 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 ZFHX4Q86UP3 3567 aa11.19□□□□□ -0.62
PACS1-213ENST00000533756 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
PACS1-213ENST00000533756 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
PACS1-213ENST00000533756 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 SEMA3EO15041 775 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 RHBDL3P58872 404 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
PACS1-213ENST00000533756 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 LPIN2Q92539 896 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 GNL3LQ9NVN8 582 aaKnown RBP11.18□□□□□ -0.62
PACS1-213ENST00000533756 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 DENND2AQ9ULE3 1009 aa11.18□□□□□ -0.62
PACS1-213ENST00000533756 FAM50BQ9Y247 325 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms