RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNF174Q15697 407 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 NCAPH2Q6IBW4 605 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 RSPH3Q86UC2 560 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 HOOK3Q86VS8 718 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 OTUD7AQ8TE49 926 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 CCDC169A6NNP5 214 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 CUTAO60888 179 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 NR1I2O75469 434 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 DBNLQ9UJU6 430 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 CNGA1P29973 690 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 HLFQ16534 295 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 DDX12PQ92771 950 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 CALUO43852 315 aaPredicted RBP12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 AKR1B10O60218 316 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 TMOD1P28289 359 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 ADD2P35612 726 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 ADORA1P30542 326 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 COPB2P35606 906 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 PRKAG2Q9UGJ0 569 aa12.61□□□□□ -0.39
AMBRA1-211ENST00000533727 HOXD10P28358 340 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 STYK1Q6J9G0 422 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 ZBTB8OSQ8IWT0 167 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 NAA15Q9BXJ9 866 aaKnown RBP12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 TXKP42681 527 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 STX10O60499 249 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 ANO1Q5XXA6 986 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
AMBRA1-211ENST00000533727 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 BMP3P12645 472 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 MST1RQ04912 1400 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 CRKP46108 304 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 TRPC3Q13507 836 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 TEKT3Q9BXF9 490 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 FGAP02671 866 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 KRT40Q6A162 431 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 LMBR1Q8WVP7 490 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
AMBRA1-211ENST00000533727 ZMYM6O95789 1325 aa12.58□□□□□ -0.39
AMBRA1-211ENST00000533727 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.39
AMBRA1-211ENST00000533727 BLIDQ8IZY5 108 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 SLIT1O75093 1534 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 CCDC175P0C221 793 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 FDX1P10109 184 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 NOP2P46087 812 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 DNM1Q05193 864 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 BIRC3Q13489 604 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 MTX1Q13505 466 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 IQSEC2Q5JU85 1478 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 PABPN1LA6NDY0 278 aaKnown RBP12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 SCG2P13521 617 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 MMP14P50281 582 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 NOX5Q96PH1 765 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 CETN3O15182 167 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 GOLGA1Q92805 767 aa12.58□□□□□ -0.4
AMBRA1-211ENST00000533727 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 ABCD1P33897 745 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 CTNNBL1Q8WYA6 563 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms