RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CPLX3Q8WVH0 158 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 SRRTQ9BXP5 876 aaKnown RBP4.45□□□□□ -1.7
ATM-220ENST00000533526 ASCC2Q9H1I8 757 aaPredicted RBP4.45□□□□□ -1.7
ATM-220ENST00000533526 ANTXR1Q9H6X2 564 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 CAPN10Q9HC96 672 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 SEMA3GQ9NS98 782 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 SLC12A7Q9Y666 1083 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 PITPNM2Q9BZ72 1349 aa4.45□□□□□ -1.7
ATM-220ENST00000533526 H3BS24 57 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 FUT4P22083 530 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 NASPP49321 788 aaPredicted RBP4.44□□□□□ -1.7
ATM-220ENST00000533526 PLCL1Q15111 1095 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 NBPF12Q5TAG4 269 aaPredicted RBP4.44□□□□□ -1.7
ATM-220ENST00000533526 TMPRSS7Q7RTY8 843 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 DTWD2Q8NBA8 298 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 PI4K2BQ8TCG2 481 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 CCDC120Q96HB5 630 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 Q96M66 194 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 DUSP15Q9H1R2 295 aaPredicted RBP4.44□□□□□ -1.7
ATM-220ENST00000533526 IGSF5Q9NSI5 407 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 ZSWIM5Q9P217 1185 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 PPT2Q9UMR5 302 aa4.44□□□□□ -1.7
ATM-220ENST00000533526 OAS3Q9Y6K5 1087 aaKnown RBP4.44□□□□□ -1.7
ATM-220ENST00000533526 COL17A1Q9UMD9 1497 aaPredicted RBP4.43□□□□□ -1.7
ATM-220ENST00000533526 SRFP11831 508 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 ATF4P18848 351 aaPredicted RBP4.43□□□□□ -1.7
ATM-220ENST00000533526 GUCY2CP25092 1073 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 GIPRP48546 466 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 IRAK1P51617 712 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 ZP2Q05996 745 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 IKZF1Q13422 519 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 XP32Q5T750 250 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 SLC23A3Q6PIS1 610 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 ZNF574Q6ZN55 896 aaPredicted RBP4.43□□□□□ -1.7
ATM-220ENST00000533526 NFXL1Q6ZNB6 911 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 SMARCC1Q92922 1105 aaPredicted RBP4.43□□□□□ -1.7
ATM-220ENST00000533526 SLC9A7Q96T83 725 aa4.43□□□□□ -1.7
ATM-220ENST00000533526 LRRN2O75325 713 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 TPP2P29144 1249 aaPredicted RBP4.42□□□□□ -1.7
ATM-220ENST00000533526 POLR2BP30876 1174 aaKnown RBP4.42□□□□□ -1.7
ATM-220ENST00000533526 CLEC16AQ2KHT3 1053 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 NBPF9Q3BBW0 867 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 BBS9Q3SYG4 887 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 TSPYL5Q86VY4 417 aaPredicted RBP4.42□□□□□ -1.7
ATM-220ENST00000533526 TMEM192Q8IY95 271 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 ABI1Q8IZP0 508 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 C19orf47Q8N9M1 422 aaKnown RBP4.42□□□□□ -1.7
ATM-220ENST00000533526 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 SLC6A18Q96N87 628 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 ATP13A1Q9HD20 1204 aa4.42□□□□□ -1.7
ATM-220ENST00000533526 SUCOQ9UBS9 1254 aaKnown RBP4.42□□□□□ -1.7
ATM-220ENST00000533526 BIN1O00499 593 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 SSBP05455 408 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATM-220ENST00000533526 ACRP10323 421 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 PMS1P54277 932 aaKnown RBP4.41□□□□□ -1.7
ATM-220ENST00000533526 CASP7P55210 303 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 ARID5AQ03989 594 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 ZNF792Q3KQV3 632 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 ANKRD39Q53RE8 183 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 UNC5AQ6ZN44 842 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 CCDC81Q6ZN84 652 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 LSRQ86X29 649 aaPredicted RBP4.41□□□□□ -1.7
ATM-220ENST00000533526 WFDC3Q8IUB2 231 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 SYTL5Q8TDW5 730 aaPredicted RBP4.41□□□□□ -1.7
ATM-220ENST00000533526 SYTL4Q96C24 671 aaPredicted RBP4.41□□□□□ -1.7
ATM-220ENST00000533526 MKRN2Q9H000 416 aaKnown RBP4.41□□□□□ -1.7
ATM-220ENST00000533526 PRR13Q9NZ81 148 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
ATM-220ENST00000533526 CD96P40200 585 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 NMIQ13287 307 aaPredicted RBP4.4□□□□□ -1.71
ATM-220ENST00000533526 AUHQ13825 339 aaKnown RBP4.4□□□□□ -1.71
ATM-220ENST00000533526 GAB4Q2WGN9 574 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 RUFY4Q6ZNE9 571 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 CBLL1Q75N03 491 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 CREG2Q8IUH2 290 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 ZNF655Q8N720 491 aaPredicted RBP4.4□□□□□ -1.71
ATM-220ENST00000533526 DAGLBQ8NCG7 672 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 SHDQ96IW2 340 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 PHAXQ9H814 394 aaKnown RBP4.4□□□□□ -1.71
ATM-220ENST00000533526 CARS2Q9HA77 564 aaKnown RBP4.4□□□□□ -1.71
ATM-220ENST00000533526 DUSP13Q9UII6 198 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 FBXL21Q9UKT6 434 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 PCDHB12Q9Y5F1 795 aa4.4□□□□□ -1.71
ATM-220ENST00000533526 A0A1W2PQH9 124 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 SIGLEC6O43699 453 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 ESR1P03372 595 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 RNASE1P07998 156 aaKnown RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 ZC3H6P61129 1189 aaKnown RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 PPP2R5EQ16537 467 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 TNNI3KQ59H18 835 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 TTC6Q86TZ1 520 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 CCDC144CPQ8IYA2 1237 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 DHX38Q92620 1227 aaKnown RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 ALPK1Q96QP1 1244 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 GMLQ99445 158 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATM-220ENST00000533526 TINF2Q9BSI4 451 aa4.39□□□□□ -1.71
ATM-220ENST00000533526 PRDM14Q9GZV8 571 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms