RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 GNAQP50148 359 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 PKP1Q13835 747 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 WASF1Q92558 559 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 LZTS2Q9BRK4 669 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 NYAP2Q9P242 653 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 PPP2R3BQ9Y5P8 575 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
TGFBR3-211ENST00000533370 ASTN2O75129 1339 aaPredicted RBP14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 PITPNM2Q9BZ72 1349 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 DTNBO60941 627 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 SLURP2P0DP57 97 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 GRM4Q14833 912 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 MTMR6Q9Y217 621 aa14.26□□□□□ -0.13
TGFBR3-211ENST00000533370 H3BQV1 296 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 IFFO2Q5TF58 517 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 USP50Q70EL3 339 aaPredicted RBP14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 NBPF11Q86T75 865 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 PHKBQ93100 1093 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
TGFBR3-211ENST00000533370 PALM3A6NDB9 673 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 GH2P01242 217 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 SMARCA1P28370 1054 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 FUT2Q10981 343 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 RRP1BQ14684 758 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 SEPT2Q15019 361 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 SUPT20HL1Q3ZLR7 823 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 DCAF15Q66K64 600 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 SIAH1Q8IUQ4 282 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 RNF26Q9BY78 433 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 MAD2L2Q9UI95 211 aa14.24□□□□□ -0.13
TGFBR3-211ENST00000533370 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 PHF20L1A8MW92 1017 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 GDF11O95390 407 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 DEXIO95424 95 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 F13A1P00488 732 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 PARP1P09874 1014 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 EEF2P13639 858 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 CAP2P40123 477 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 ATP2B2Q01814 1243 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 DCPSQ96C86 337 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 ALG1Q9BT22 464 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 GGA3Q9NZ52 723 aa14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 V9GY48 417 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-211ENST00000533370 IQCA1LA6NCM1 817 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 PLEKHA8P1O95397 391 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 EPHX2P34913 555 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 JAG1P78504 1218 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 ICA1Q05084 483 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 TRIM29Q14134 588 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 CMTR1Q8N1G2 835 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 SCAF8Q9UPN6 1271 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
TGFBR3-211ENST00000533370 USP17L5A8MUK1 530 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 ASNSP08243 561 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 PDHBP11177 359 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 MCM4P33991 863 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 ASPRV1Q53RT3 343 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 PNMA8AQ86V59 439 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 LRRC47Q8N1G4 583 aaKnown RBP14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 STAG2Q8N3U4 1231 aa14.21□□□□□ -0.13
TGFBR3-211ENST00000533370 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms