RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	RAG1	P15918	1043 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	ATP2B1	P20020	1258 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	PRAMEF13	Q5VWM6	474 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	ARMCX6	Q7L4S7	300 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	PHACTR4	Q8IZ21	702 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	SHISA5	Q8N114	240 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	C20orf173	Q96LM9	149 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	TMPRSS5	Q9H3S3	457 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	FBRS	Q9HAH7	460 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	PRKAG2	Q9UGJ0	569 aa		5.26	□□□□□ -1.57
LMO7-223	ENST00000533299	SLC22A31	A6NKX4	558 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	CYP7A1	P22680	504 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	SLBP	Q14493	270 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	MLANA	Q16655	118 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	SEZ6L2	Q6UXD5	910 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	CCDC74B	Q96LY2	380 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	TM9SF2	Q99805	663 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	PRDM10	Q9NQV6	1147 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	PPT2	Q9UMR5	302 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	SLC12A7	Q9Y666	1083 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	MEIS3P2	A8K0S8	358 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	RNASE1	P07998	156 aa	Known RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	GBP1	P32455	592 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	CCNF	P41002	786 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	ETV3	P41162	512 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	NKG7	Q16617	165 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	OGFOD3	Q6PK18	319 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	NLRC3	Q7RTR2	1065 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	SREK1	Q8WXA9	508 aa	Known RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	COX4I2	Q96KJ9	171 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	C1GALT1	Q9NS00	363 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	MBNL3	Q9NUK0	354 aa	Known RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	GTF2IRD1	Q9UHL9	959 aa		5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.25	□□□□□ -1.57
LMO7-223	ENST00000533299	DYNC1LI2	O43237	492 aa	Predicted RBP	5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	CDK5R2	Q13319	367 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	TNNI3K	Q59H18	835 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	ARSH	Q5FYA8	562 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	CDCP2	Q5VXM1	449 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	INTS3	Q68E01	1043 aa	Known RBP	5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	OVOS1	Q6IE37	1185 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	CCDC81	Q6ZN84	652 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	SPRED2	Q7Z698	418 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	CYB5D2	Q8WUJ1	264 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	MIPEP	Q99797	713 aa		5.24	□□□□□ -1.57
LMO7-223	ENST00000533299	CHURC1-FNTB	B4DL54	471 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	STK10	O94804	968 aa	Known RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	FGR	P09769	529 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	FAM87A	P0C7U9	286 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	GIPR	P48546	466 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	LETMD1	Q6P1Q0	360 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ARHGAP27	Q6ZUM4	889 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	SYDE1	Q6ZW31	735 aa	Predicted RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	TAB3	Q8N5C8	712 aa	Predicted RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	TOP6BL	Q8N6T0	577 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	XAGE3	Q8WTP9	111 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ARMC5	Q96C12	935 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ANAPC16	Q96DE5	110 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ATG4C	Q96DT6	458 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	DUSP23	Q9BVJ7	150 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	CNNM2	Q9H8M5	875 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	TPX2	Q9ULW0	747 aa	Known RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	UPK3BL1	B0FP48	263 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	UPK3BL2	E5RIL1	263 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	RGS13	O14921	159 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	NME1	P15531	152 aa	Known RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ADM	P35318	185 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	UBE3D	Q7Z6J8	389 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	ZSWIM9	Q86XI8	627 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	MCF2L2	Q86YR7	1114 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	LRRN4CL	Q8ND94	238 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	FLAD1	Q8NFF5	587 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	DHRS1	Q96LJ7	313 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	DRC1	Q96MC2	740 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	DPH2	Q9BQC3	489 aa	Predicted RBP	5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	CEP131	Q9UPN4	1083 aa		5.23	□□□□□ -1.57
LMO7-223	ENST00000533299	TNFRSF10C	O14798	259 aa		5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	GUCY2C	P25092	1073 aa		5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	LSR	Q86X29	649 aa	Predicted RBP	5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	C19orf47	Q8N9M1	422 aa	Known RBP	5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	SHD	Q96IW2	340 aa		5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.22	□□□□□ -1.57
LMO7-223	ENST00000533299	NFIB	O00712	420 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	FOXD2	O60548	495 aa	Predicted RBP	5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	C1QTNF9	P0C862	333 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	PPP2R5E	Q16537	467 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	SOGA3	Q5TF21	947 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	GGN	Q86UU5	652 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	CKAP2L	Q8IYA6	745 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	GATA6	Q92908	595 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	KIF2C	Q99661	725 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	MAPK8IP1	Q9UQF2	711 aa		5.21	□□□□□ -1.58
LMO7-223	ENST00000533299	ZNF503-AS2	A6NEH8	195 aa		5.2	□□□□□ -1.58
LMO7-223	ENST00000533299	FAM170B	A6NMN3	283 aa		5.2	□□□□□ -1.58
LMO7-223	ENST00000533299	GNAT3	A8MTJ3	354 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms