RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 STOX1Q6ZVD7 989 aa29.31■■■□□ 2.28
USP48-214ENST00000532737 VCPKMTQ9H867 229 aa29.31■■■□□ 2.28
USP48-214ENST00000532737 E7EWF7 191 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 VCAM1P19320 739 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 MKL1Q969V6 931 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 KRT23Q9C075 422 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 CNNM2Q9H8M5 875 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 TCP11L1Q9NUJ3 509 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 LOC285556D6RIA3 1793 aa29.3■■■□□ 2.28
USP48-214ENST00000532737 HOXA7P31268 230 aaPredicted RBP29.29■■■□□ 2.28
USP48-214ENST00000532737 NOVP48745 357 aa29.29■■■□□ 2.28
USP48-214ENST00000532737 ZSWIM5Q9P217 1185 aa29.29■■■□□ 2.28
USP48-214ENST00000532737 NT5C2P49902 561 aa29.28■■■□□ 2.28
USP48-214ENST00000532737 PABPC4Q13310 644 aaKnown RBP eCLIP29.28■■■□□ 2.28
USP48-214ENST00000532737 SPICE1Q8N0Z3 855 aa29.28■■■□□ 2.28
USP48-214ENST00000532737 LRRC47Q8N1G4 583 aaKnown RBP29.28■■■□□ 2.28
USP48-214ENST00000532737 PARK7Q99497 189 aaKnown RBP29.28■■■□□ 2.28
USP48-214ENST00000532737 ASCC2Q9H1I8 757 aaPredicted RBP29.28■■■□□ 2.28
USP48-214ENST00000532737 STX8Q9UNK0 236 aa29.28■■■□□ 2.28
USP48-214ENST00000532737 TLR2O60603 784 aa29.27■■■□□ 2.28
USP48-214ENST00000532737 REC8O95072 547 aa29.27■■■□□ 2.28
USP48-214ENST00000532737 LPAR1Q92633 364 aa29.27■■■□□ 2.28
USP48-214ENST00000532737 ZKSCAN3Q9BRR0 538 aa29.27■■■□□ 2.28
USP48-214ENST00000532737 ADGRA2Q96PE1 1338 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 F5H6K3 240 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 GPR25O00155 361 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 OSBPP22059 807 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 KLRC3Q07444 240 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 TRDNQ13061 729 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 PPP4R3BQ5MIZ7 849 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 CTU1Q7Z7A3 348 aaKnown RBP29.26■■■□□ 2.27
USP48-214ENST00000532737 RPAP3Q9H6T3 665 aaPredicted RBP29.26■■■□□ 2.27
USP48-214ENST00000532737 GOPCQ9HD26 462 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 PNMA3Q9UL41 463 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 PDE4DIPQ5VU43 2346 aa29.26■■■□□ 2.27
USP48-214ENST00000532737 USP17L15C9J2P7 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L13C9JLJ4 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L11C9JVI0 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L18D6R9N7 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L22D6RA61 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L17D6RBQ6 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L19D6RCP7 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L20D6RJB6 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 RAD21O60216 631 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 USP17L24Q0WX57 530 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 RCSD1Q6JBY9 416 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 CATSPERGQ6ZRH7 1159 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 CYB5R4Q7L1T6 521 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 P2RX7Q99572 595 aaKnown RBP29.25■■■□□ 2.27
USP48-214ENST00000532737 SYNPO2Q9UMS6 1093 aa29.25■■■□□ 2.27
USP48-214ENST00000532737 NDUFB10O96000 172 aa29.24■■■□□ 2.27
USP48-214ENST00000532737 IRX3P78415 501 aaPredicted RBP29.24■■■□□ 2.27
USP48-214ENST00000532737 NOM1Q5C9Z4 860 aaKnown RBP29.24■■■□□ 2.27
USP48-214ENST00000532737 C17orf99Q6UX52 265 aa29.24■■■□□ 2.27
USP48-214ENST00000532737 NCOA7Q8NI08 942 aa29.24■■■□□ 2.27
USP48-214ENST00000532737 CPA4Q9UI42 421 aa29.24■■■□□ 2.27
USP48-214ENST00000532737 RNF20Q5VTR2 975 aa29.23■■■□□ 2.27
USP48-214ENST00000532737 IQCA1Q86XH1 822 aa29.23■■■□□ 2.27
USP48-214ENST00000532737 RASEFQ8IZ41 740 aa29.23■■■□□ 2.27
USP48-214ENST00000532737 ZNF296Q8WUU4 475 aaPredicted RBP29.23■■■□□ 2.27
USP48-214ENST00000532737 TTC14Q96N46 770 aa29.23■■■□□ 2.27
USP48-214ENST00000532737 WDR46O15213 610 aaKnown RBP29.22■■■□□ 2.27
USP48-214ENST00000532737 RALYLQ86SE5 291 aaKnown RBP29.22■■■□□ 2.27
USP48-214ENST00000532737 GMCL1P1Q8NEA9 526 aa29.22■■■□□ 2.27
USP48-214ENST00000532737 SMCR8Q8TEV9 937 aaPredicted RBP29.22■■■□□ 2.27
USP48-214ENST00000532737 ZSCAN10Q96SZ4 725 aaPredicted RBP29.22■■■□□ 2.27
USP48-214ENST00000532737 NUP88Q99567 741 aaPredicted RBP29.22■■■□□ 2.27
USP48-214ENST00000532737 TMEM47Q9BQJ4 181 aa29.22■■■□□ 2.27
USP48-214ENST00000532737 TOP1P11387 765 aaKnown RBP29.21■■■□□ 2.27
USP48-214ENST00000532737 HSPA4P34932 840 aa29.21■■■□□ 2.27
USP48-214ENST00000532737 FAM83BQ5T0W9 1011 aa29.21■■■□□ 2.27
USP48-214ENST00000532737 MB21D2Q8IYB1 491 aaPredicted RBP29.21■■■□□ 2.27
USP48-214ENST00000532737 TANGO6Q9C0B7 1094 aa29.21■■■□□ 2.27
USP48-214ENST00000532737 HERVK_113P62684 666 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 COL9A3Q14050 684 aaPredicted RBP29.2■■■□□ 2.26
USP48-214ENST00000532737 CCDC178Q5BJE1 867 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 SLFN13Q68D06 897 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 DGKHQ86XP1 1220 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 KCNB2Q92953 911 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 USP26Q9BXU7 913 aa29.2■■■□□ 2.26
USP48-214ENST00000532737 EPB41L2O43491 1005 aaKnown RBP29.19■■■□□ 2.26
USP48-214ENST00000532737 FKTNO75072 461 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 BCRP11274 1271 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 TSGA10IPQ3SY00 556 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 POTEEQ6S8J3 1075 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 CHST3Q7LGC8 479 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 ENAHQ8N8S7 591 aaPredicted RBP29.19■■■□□ 2.26
USP48-214ENST00000532737 ANKS1AQ92625 1134 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 UBAC1Q9BSL1 405 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 TNKSO95271 1327 aa29.19■■■□□ 2.26
USP48-214ENST00000532737 ANTXR2P58335 489 aa29.18■■■□□ 2.26
USP48-214ENST00000532737 SP3Q02447 781 aa29.18■■■□□ 2.26
USP48-214ENST00000532737 CHMP4CQ96CF2 233 aa29.18■■■□□ 2.26
USP48-214ENST00000532737 MYH4Q9Y623 1939 aa29.18■■■□□ 2.26
USP48-214ENST00000532737 ZKSCAN1P17029 563 aaPredicted RBP29.17■■■□□ 2.26
USP48-214ENST00000532737 GCLCP48506 637 aaPredicted RBP29.17■■■□□ 2.26
USP48-214ENST00000532737 SOX10P56693 466 aa29.17■■■□□ 2.26
USP48-214ENST00000532737 COG2Q14746 738 aa29.17■■■□□ 2.26
USP48-214ENST00000532737 SEC23AQ15436 765 aa29.17■■■□□ 2.26
USP48-214ENST00000532737 FBXO28Q9NVF7 368 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms