RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PLEKHH3Q7Z736 793 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 CCDC17Q96LX7 622 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 NUDT12Q9BQG2 462 aa22.73■■□□□ 1.23
SSH3-209ENST00000532600 ARPP21Q9UBL0 812 aaPredicted RBP22.73■■□□□ 1.23
SSH3-209ENST00000532600 XRCC5P13010 732 aaKnown RBP22.72■■□□□ 1.23
SSH3-209ENST00000532600 HDAC1Q13547 482 aaPredicted RBP22.72■■□□□ 1.23
SSH3-209ENST00000532600 GIMAP6Q6P9H5 292 aa22.72■■□□□ 1.23
SSH3-209ENST00000532600 SOCS4Q8WXH5 440 aa22.72■■□□□ 1.23
SSH3-209ENST00000532600 DDRGK1Q96HY6 314 aa22.72■■□□□ 1.23
SSH3-209ENST00000532600 CEP290O15078 2479 aa22.72■■□□□ 1.23
SSH3-209ENST00000532600 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
SSH3-209ENST00000532600 GLRX3O76003 335 aaKnown RBP22.71■■□□□ 1.23
SSH3-209ENST00000532600 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
SSH3-209ENST00000532600 ZFYP08048 801 aaPredicted RBP22.71■■□□□ 1.23
SSH3-209ENST00000532600 EEF2P13639 858 aaKnown RBP22.71■■□□□ 1.23
SSH3-209ENST00000532600 AMOTL1Q8IY63 956 aa22.71■■□□□ 1.23
SSH3-209ENST00000532600 SPICE1Q8N0Z3 855 aa22.71■■□□□ 1.23
SSH3-209ENST00000532600 VCPKMTQ9H867 229 aa22.71■■□□□ 1.23
SSH3-209ENST00000532600 ERC2O15083 957 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 RASA1P20936 1047 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 AAMPQ13685 434 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 COG2Q14746 738 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 ANKRD45Q5TZF3 282 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 STK11IPQ8N1F8 1099 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 ARHGEF10LQ9HCE6 1279 aa22.7■■□□□ 1.22
SSH3-209ENST00000532600 RPTORQ8N122 1335 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 H0YGN5 161 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
SSH3-209ENST00000532600 RGS2P41220 211 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 MNX1P50219 401 aaPredicted RBP22.69■■□□□ 1.22
SSH3-209ENST00000532600 ZMYM1Q5SVZ6 1142 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 LPAR1Q92633 364 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 FLRT1Q9NZU1 646 aa22.69■■□□□ 1.22
SSH3-209ENST00000532600 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 FOXP2O15409 715 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 PRKAR2AP13861 404 aaKnown RBP22.68■■□□□ 1.22
SSH3-209ENST00000532600 PTPREP23469 700 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 DSG3P32926 999 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 CCNA1P78396 465 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 CACNB2Q08289 660 aaPredicted RBP22.68■■□□□ 1.22
SSH3-209ENST00000532600 MAP2K5Q13163 448 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 DIS3LQ8TF46 1054 aaKnown RBP22.68■■□□□ 1.22
SSH3-209ENST00000532600 APBA2Q99767 749 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 FSD1Q9BTV5 496 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 MOV10L1Q9BXT6 1211 aaKnown RBP22.68■■□□□ 1.22
SSH3-209ENST00000532600 KANSL2Q9H9L4 492 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 ALPK3Q96L96 1907 aa22.68■■□□□ 1.22
SSH3-209ENST00000532600 GRB14Q14449 540 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 CCAR1Q8IX12 1150 aaKnown RBP22.67■■□□□ 1.22
SSH3-209ENST00000532600 IFNL3Q8IZI9 196 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 ATG4CQ96DT6 458 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 HMX1Q9NP08 348 aaPredicted RBP22.67■■□□□ 1.22
SSH3-209ENST00000532600 HOXC10Q9NYD6 342 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 STAP2Q9UGK3 403 aa22.67■■□□□ 1.22
SSH3-209ENST00000532600 SLC15A5A6NIM6 579 aa22.66■■□□□ 1.22
SSH3-209ENST00000532600 PATL2C9JE40 543 aaKnown RBP22.66■■□□□ 1.22
SSH3-209ENST00000532600 IGHA2P01877 340 aa22.66■■□□□ 1.22
SSH3-209ENST00000532600 ZKSCAN1P17029 563 aaPredicted RBP22.66■■□□□ 1.22
SSH3-209ENST00000532600 GNAT2P19087 354 aa22.66■■□□□ 1.22
SSH3-209ENST00000532600 NPLOC4Q8TAT6 608 aa22.66■■□□□ 1.22
SSH3-209ENST00000532600 COL11A1P12107 1806 aaPredicted RBP22.66■■□□□ 1.22
SSH3-209ENST00000532600 IGKV6D-41A0A0C4DH26 115 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 WDR46O15213 610 aaKnown RBP22.65■■□□□ 1.22
SSH3-209ENST00000532600 FLOT1O75955 427 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 IGHDP01880 384 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 CCND3P30281 292 aaPredicted RBP22.65■■□□□ 1.22
SSH3-209ENST00000532600 PDE1AP54750 535 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 ATP2B2Q01814 1243 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 WDR78Q5VTH9 848 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 CCDC129Q6ZRS4 1044 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 DPF3Q92784 378 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 PAWRQ96IZ0 340 aaKnown RBP22.65■■□□□ 1.22
SSH3-209ENST00000532600 SPATC1LQ9H0A9 340 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 SH2D4AQ9H788 454 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 FBXO28Q9NVF7 368 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 ADAMTS5Q9UNA0 930 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 ZNF236Q9UL36 1845 aa22.65■■□□□ 1.22
SSH3-209ENST00000532600 PRDM1O75626 825 aa22.64■■□□□ 1.21
SSH3-209ENST00000532600 HOXC6P09630 235 aa22.64■■□□□ 1.21
SSH3-209ENST00000532600 TDO2P48775 406 aa22.64■■□□□ 1.21
SSH3-209ENST00000532600 HABP4Q5JVS0 413 aaKnown RBP22.64■■□□□ 1.21
SSH3-209ENST00000532600 TRMT44Q8IYL2 757 aaKnown RBP22.64■■□□□ 1.21
SSH3-209ENST00000532600 APPP05067 770 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 CAPN2P17655 700 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 ERCC3P19447 782 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 TMEM132BQ14DG7 1078 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 LHX8Q68G74 356 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 MKNK2Q9HBH9 465 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 OGDHLQ9ULD0 1010 aa22.63■■□□□ 1.21
SSH3-209ENST00000532600 COLQQ9Y215 455 aaPredicted RBP22.63■■□□□ 1.21
SSH3-209ENST00000532600 LRRFIP1Q32MZ4 808 aaKnown RBP22.62■■□□□ 1.21
SSH3-209ENST00000532600 FAM83BQ5T0W9 1011 aa22.62■■□□□ 1.21
SSH3-209ENST00000532600 MB21D1Q8N884 522 aa22.62■■□□□ 1.21
SSH3-209ENST00000532600 SHCBP1Q8NEM2 672 aa22.62■■□□□ 1.21
SSH3-209ENST00000532600 NUP88Q99567 741 aaPredicted RBP22.62■■□□□ 1.21
SSH3-209ENST00000532600 HTATIP2Q9BUP3 242 aa22.62■■□□□ 1.21
SSH3-209ENST00000532600 CWC22Q9HCG8 908 aaKnown RBP22.62■■□□□ 1.21
SSH3-209ENST00000532600 NYAP2Q9P242 653 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms