RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 NOGQ13253 232 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 KIF2CQ99661 725 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 TMEM47Q9BQJ4 181 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 CYP46A1Q9Y6A2 500 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 MANSC4A6NHS7 340 aaPredicted RBP19.88■□□□□ 0.77
SF3B2-211ENST00000531041 WTAPQ15007 396 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 TMEM67Q5HYA8 995 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 IFIT1BQ5T764 474 aaKnown RBP19.88■□□□□ 0.77
SF3B2-211ENST00000531041 USP17L2Q6R6M4 530 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 FBXL16Q8N461 479 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 C12orf42Q96LP6 360 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 GOPCQ9HD26 462 aa19.88■□□□□ 0.77
SF3B2-211ENST00000531041 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
SF3B2-211ENST00000531041 TESPA1A2RU30 521 aaPredicted RBP19.87■□□□□ 0.77
SF3B2-211ENST00000531041 SH2B2O14492 632 aaPredicted RBP19.87■□□□□ 0.77
SF3B2-211ENST00000531041 CETPP11597 493 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 LIFRP42702 1097 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 VEGFBP49765 207 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 HMGCS2P54868 508 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 INHBEP58166 350 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 GRM1Q13255 1194 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 PROCA1Q8NCQ7 364 aaPredicted RBP19.87■□□□□ 0.77
SF3B2-211ENST00000531041 GMCL1P1Q8NEA9 526 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 UPF3BQ9BZI7 483 aaKnown RBP19.87■□□□□ 0.77
SF3B2-211ENST00000531041 LY9Q9HBG7 655 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 EMILIN3Q9NT22 766 aa19.87■□□□□ 0.77
SF3B2-211ENST00000531041 RLFQ13129 1914 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 F5H6K3 240 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 KLRC3Q07444 240 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 MOGSQ13724 837 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 ZYXQ15942 572 aaKnown RBP19.86■□□□□ 0.77
SF3B2-211ENST00000531041 FASTKD5Q7L8L6 764 aaKnown RBP19.86■□□□□ 0.77
SF3B2-211ENST00000531041 LRRC47Q8N1G4 583 aaKnown RBP19.86■□□□□ 0.77
SF3B2-211ENST00000531041 LPAR1Q92633 364 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 TCEANC2Q96MN5 208 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 LRRC2Q9BYS8 371 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 AGXT2Q9BYV1 514 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
SF3B2-211ENST00000531041 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 MAP2K2P36507 400 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 CCL15Q16663 113 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 PNMA1Q8ND90 353 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 KAT14Q9H8E8 782 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 GPHNQ9NQX3 736 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-211ENST00000531041 AOC2O75106 756 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 TM4SF4P48230 202 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-211ENST00000531041 SREBF2Q12772 1141 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 DGKZQ13574 1117 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 KIAA1755Q5JYT7 1200 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 Q6ZUG5 572 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 SGMS1Q86VZ5 419 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 REM2Q8IYK8 340 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-211ENST00000531041 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 ZIC5Q96T25 663 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 ALDH8A1Q9H2A2 487 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-211ENST00000531041 SENP2Q9HC62 589 aa19.85■□□□□ 0.77
SF3B2-211ENST00000531041 NDUFB10O96000 172 aa19.84■□□□□ 0.77
SF3B2-211ENST00000531041 GADL1Q6ZQY3 521 aa19.84■□□□□ 0.77
SF3B2-211ENST00000531041 PDRG1Q9NUG6 133 aa19.84■□□□□ 0.77
SF3B2-211ENST00000531041 WDR46O15213 610 aaKnown RBP19.83■□□□□ 0.76
SF3B2-211ENST00000531041 VCAM1P19320 739 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 NEK4P51957 841 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 FGD1P98174 961 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 SLFN13Q68D06 897 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 GPAT2Q6NUI2 795 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 DNAJC5GQ8N7S2 189 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 IL27Q8NEV9 243 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 GMCL1Q96IK5 515 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 PTPN18Q99952 460 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.76
SF3B2-211ENST00000531041 MYH6P13533 1939 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 CCDC69A6NI79 296 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 SNHG28P0DPA3 235 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 RABEP1Q15276 862 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 ANKRD23Q86SG2 305 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 SPICE1Q8N0Z3 855 aa19.82■□□□□ 0.76
SF3B2-211ENST00000531041 ZCCHC17Q9NP64 241 aaKnown RBP19.82■□□□□ 0.76
SF3B2-211ENST00000531041 COL11A1P12107 1806 aaPredicted RBP19.82■□□□□ 0.76
SF3B2-211ENST00000531041 RAD21O60216 631 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 PDHBP11177 359 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 HOXA7P31268 230 aaPredicted RBP19.81■□□□□ 0.76
SF3B2-211ENST00000531041 TROAPQ12815 778 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 TOB2Q14106 344 aaPredicted RBP19.81■□□□□ 0.76
SF3B2-211ENST00000531041 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 DCAF4Q8WV16 495 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 BRF1Q92994 677 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 SLC45A1Q9Y2W3 748 aa19.81■□□□□ 0.76
SF3B2-211ENST00000531041 BTBD19C9JJ37 291 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 EVCP57679 992 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
SF3B2-211ENST00000531041 APOA5Q6Q788 366 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 IFNL1Q8IU54 200 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 MAP3K14Q99558 947 aa19.8■□□□□ 0.76
SF3B2-211ENST00000531041 RPAP3Q9H6T3 665 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms