RNA–Protein interactions for RNA: ENST00000529693.1

PUF60-214, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 684 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-214ENST00000529693 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
PUF60-214ENST00000529693 TTC14Q96N46 770 aa20.53■□□□□ 0.88
PUF60-214ENST00000529693 TMEM47Q9BQJ4 181 aa20.53■□□□□ 0.88
PUF60-214ENST00000529693 SENP2Q9HC62 589 aa20.53■□□□□ 0.88
PUF60-214ENST00000529693 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
PUF60-214ENST00000529693 PRC1O43663 620 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 USP14P54578 494 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 EXOSC10Q01780 885 aaKnown RBP20.52■□□□□ 0.88
PUF60-214ENST00000529693 SREBF2Q12772 1141 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.88
PUF60-214ENST00000529693 DGKHQ86XP1 1220 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 IFNL1Q8IU54 200 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 IGDCC4Q8TDY8 1250 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 TCEANC2Q96MN5 208 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 VCPKMTQ9H867 229 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 TMOD4Q9NZQ9 345 aa20.52■□□□□ 0.88
PUF60-214ENST00000529693 CEP350Q5VT06 3117 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 IFIT3O14879 490 aaKnown RBP20.51■□□□□ 0.87
PUF60-214ENST00000529693 TOP1P11387 765 aaKnown RBP20.51■□□□□ 0.87
PUF60-214ENST00000529693 MCM5P33992 734 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 SPICE1Q8N0Z3 855 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 LRRC2Q9BYS8 371 aa20.51■□□□□ 0.87
PUF60-214ENST00000529693 F5H6K3 240 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 NDUFB10O96000 172 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 VCAM1P19320 739 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 ANAPC15P60006 121 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 KLRC3Q07444 240 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
PUF60-214ENST00000529693 RASGRP2Q7LDG7 609 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 REM2Q8IYK8 340 aaPredicted RBP20.5■□□□□ 0.87
PUF60-214ENST00000529693 IL17RAQ96F46 866 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 AGTPBP1Q9UPW5 1226 aa20.5■□□□□ 0.87
PUF60-214ENST00000529693 RAD21O60216 631 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
PUF60-214ENST00000529693 TMEM67Q5HYA8 995 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 JMYQ8N9B5 988 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 CHMP4CQ96CF2 233 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 NUP88Q99567 741 aaPredicted RBP20.49■□□□□ 0.87
PUF60-214ENST00000529693 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 TM6SF1Q9BZW5 370 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 GOPCQ9HD26 462 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 SYNPO2Q9UMS6 1093 aa20.49■□□□□ 0.87
PUF60-214ENST00000529693 PDHXO00330 501 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 SH2B2O14492 632 aaPredicted RBP20.48■□□□□ 0.87
PUF60-214ENST00000529693 RPS6KB1P23443 525 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 PSMA5P28066 241 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 WTAPQ15007 396 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
PUF60-214ENST00000529693 SLFN13Q68D06 897 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 LPAR1Q92633 364 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 MTA3Q9BTC8 594 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 LY9Q9HBG7 655 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 ZSWIM6Q9HCJ5 1215 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 WDR19Q8NEZ3 1342 aa20.48■□□□□ 0.87
PUF60-214ENST00000529693 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
PUF60-214ENST00000529693 HOXA7P31268 230 aaPredicted RBP20.47■□□□□ 0.87
PUF60-214ENST00000529693 FAM83BQ5T0W9 1011 aa20.47■□□□□ 0.87
PUF60-214ENST00000529693 KIF2CQ99661 725 aa20.47■□□□□ 0.87
PUF60-214ENST00000529693 UPF3BQ9BZI7 483 aaKnown RBP20.47■□□□□ 0.87
PUF60-214ENST00000529693 RPAP3Q9H6T3 665 aaPredicted RBP20.47■□□□□ 0.87
PUF60-214ENST00000529693 RNF186Q9NXI6 227 aa20.47■□□□□ 0.87
PUF60-214ENST00000529693 COL11A1P12107 1806 aaPredicted RBP20.47■□□□□ 0.87
PUF60-214ENST00000529693 ERICH2A1L162 156 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 WDR46O15213 610 aaKnown RBP20.46■□□□□ 0.87
PUF60-214ENST00000529693 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
PUF60-214ENST00000529693 SART3Q15020 963 aaKnown RBP20.46■□□□□ 0.87
PUF60-214ENST00000529693 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 RUFY3Q7L099 469 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 R3HDMLQ9H3Y0 253 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 KAT14Q9H8E8 782 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 SLC45A1Q9Y2W3 748 aa20.46■□□□□ 0.87
PUF60-214ENST00000529693 TRPA1O75762 1119 aa20.45■□□□□ 0.86
PUF60-214ENST00000529693 CYP2C8P10632 490 aa20.45■□□□□ 0.86
PUF60-214ENST00000529693 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
PUF60-214ENST00000529693 TAF1CQ15572 869 aaPredicted RBP20.45■□□□□ 0.86
PUF60-214ENST00000529693 OTUD7BQ6GQQ9 843 aa20.45■□□□□ 0.86
PUF60-214ENST00000529693 GMCL1Q96IK5 515 aa20.45■□□□□ 0.86
PUF60-214ENST00000529693 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
PUF60-214ENST00000529693 ZCCHC17Q9NP64 241 aaKnown RBP20.45■□□□□ 0.86
PUF60-214ENST00000529693 USP17L15C9J2P7 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L13C9JLJ4 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L11C9JVI0 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L18D6R9N7 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L22D6RA61 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L17D6RBQ6 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L19D6RCP7 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 USP17L20D6RJB6 530 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
PUF60-214ENST00000529693 PDHBP11177 359 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms