RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 MTMR7Q9Y216 660 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 TMX2Q9Y320 296 aa13.42□□□□□ -0.26
CHD7-209ENST00000529472 ERICH2A1L162 156 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
CHD7-209ENST00000529472 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 KIAA1755Q5JYT7 1200 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 IFIT1BQ5T764 474 aaKnown RBP13.41□□□□□ -0.26
CHD7-209ENST00000529472 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
CHD7-209ENST00000529472 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 PTPN18Q99952 460 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 C22orf23Q9BZE7 217 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 VCPKMTQ9H867 229 aa13.41□□□□□ -0.26
CHD7-209ENST00000529472 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 F5H6K3 240 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHD7-209ENST00000529472 NDUFB10O96000 172 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 VCAM1P19320 739 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 PSMA5P28066 241 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 NOVP48745 357 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 ANAPC15P60006 121 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 KLRC3Q07444 240 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 WTAPQ15007 396 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 SEC23AQ15436 765 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 SH3D19Q5HYK7 790 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 DGKHQ86XP1 1220 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 MKL1Q969V6 931 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 C12orf42Q96LP6 360 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 ISY1Q9ULR0 285 aaKnown RBP13.4□□□□□ -0.26
CHD7-209ENST00000529472 AGTPBP1Q9UPW5 1226 aa13.4□□□□□ -0.26
CHD7-209ENST00000529472 PDHXO00330 501 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
CHD7-209ENST00000529472 RPS6KB1P23443 525 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 TM4SF4P48230 202 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 INHBEP58166 350 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 FGD1P98174 961 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 RASGRP2Q7LDG7 609 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
CHD7-209ENST00000529472 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 GMCL1P1Q8NEA9 526 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 LPAR1Q92633 364 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 TTC14Q96N46 770 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
CHD7-209ENST00000529472 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
CHD7-209ENST00000529472 LY9Q9HBG7 655 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
CHD7-209ENST00000529472 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
CHD7-209ENST00000529472 FAM83BQ5T0W9 1011 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
CHD7-209ENST00000529472 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 RUFY3Q7L099 469 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 ANKRD23Q86SG2 305 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
CHD7-209ENST00000529472 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
CHD7-209ENST00000529472 RBM25P49756 843 aaKnown RBP13.37□□□□□ -0.27
CHD7-209ENST00000529472 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
CHD7-209ENST00000529472 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHD7-209ENST00000529472 CCDC96Q2M329 555 aa13.37□□□□□ -0.27
CHD7-209ENST00000529472 Q6ZUG5 572 aa13.37□□□□□ -0.27
CHD7-209ENST00000529472 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
CHD7-209ENST00000529472 MTA3Q9BTC8 594 aa13.37□□□□□ -0.27
CHD7-209ENST00000529472 CCDC69A6NI79 296 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 CYP2C8P10632 490 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 OSBPP22059 807 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 SLC1A4P43007 532 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
CHD7-209ENST00000529472 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms