RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 CXCL11O14625 94 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 NDUFB10O96000 172 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 ZBTB48P10074 688 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-217ENST00000529133 AK2P54819 239 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 BACE1P56817 501 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
CAPN1-217ENST00000529133 DGKZQ13574 1117 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 ZYXQ15942 572 aaKnown RBP13.42□□□□□ -0.26
CAPN1-217ENST00000529133 KIAA1755Q5JYT7 1200 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 SGMS1Q86VZ5 419 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
CAPN1-217ENST00000529133 A0A0G2JLL6 359 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-217ENST00000529133 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-217ENST00000529133 C19orf81C9J6K1 198 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 F5H6K3 240 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 USP14P54578 494 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 HMGCS2P54868 508 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 KLRC3Q07444 240 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 APOBRQ0VD83 1088 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 SH3D19Q5HYK7 790 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 PRRT2Q7Z6L0 340 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-217ENST00000529133 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 C12orf42Q96LP6 360 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 MYL10Q9BUA6 226 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
CAPN1-217ENST00000529133 ST18O60284 1047 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 DDAH1O94760 285 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 EVCP57679 992 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 HTRA3P83110 453 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 SNAPC2Q13487 334 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 MOGSQ13724 837 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 SLFN13Q68D06 897 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 CYP4F22Q6NT55 531 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 PAXIP1Q6ZW49 1069 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-217ENST00000529133 NOL8Q76FK4 1167 aaKnown RBP13.4□□□□□ -0.26
CAPN1-217ENST00000529133 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 LPAR1Q92633 364 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 LARP6Q9BRS8 491 aaKnown RBP13.4□□□□□ -0.26
CAPN1-217ENST00000529133 MTMR7Q9Y216 660 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 SLC12A7Q9Y666 1083 aa13.4□□□□□ -0.26
CAPN1-217ENST00000529133 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 RAD21O60216 631 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 CD2BP2O95400 341 aaKnown RBP13.39□□□□□ -0.27
CAPN1-217ENST00000529133 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 PDHBP11177 359 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 HSPA6P17066 643 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 GTF2A2P52657 109 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 TROAPQ12815 778 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 RAB11FIP4Q86YS3 637 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 NUP133Q8WUM0 1156 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-217ENST00000529133 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
CAPN1-217ENST00000529133 NID2Q14112 1375 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 CCL15-CCL14A0A0B4J2E2 113 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 WDR46O15213 610 aaKnown RBP13.38□□□□□ -0.27
CAPN1-217ENST00000529133 ZBTB43O43298 467 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 CETPP11597 493 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 VCAM1P19320 739 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 RXRAP19793 462 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 RCAN1P53805 252 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 GRM1Q13255 1194 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 GRM4Q14833 912 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 CCL15Q16663 113 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 GADL1Q6ZQY3 521 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 PROCA1Q8NCQ7 364 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-217ENST00000529133 BRI3BPQ8WY22 251 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-217ENST00000529133 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
CAPN1-217ENST00000529133 MYH4Q9Y623 1939 aa13.37□□□□□ -0.27
CAPN1-217ENST00000529133 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-217ENST00000529133 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms