RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 PROCA1Q8NCQ7 364 aaPredicted RBP16.95■□□□□ 0.3
UBXN1-209ENST00000528907 UPF2Q9HAU5 1272 aaKnown RBP16.95■□□□□ 0.3
UBXN1-209ENST00000528907 ZCCHC17Q9NP64 241 aaKnown RBP16.95■□□□□ 0.3
UBXN1-209ENST00000528907 MOGSQ13724 837 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 USP17L2Q6R6M4 530 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 FASTKD5Q7L8L6 764 aaKnown RBP16.94■□□□□ 0.3
UBXN1-209ENST00000528907 GMCL1P1Q8NEA9 526 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 IL27Q8NEV9 243 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 ZSWIM6Q9HCJ5 1215 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 TNKSO95271 1327 aa16.94■□□□□ 0.3
UBXN1-209ENST00000528907 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 NMT2O60551 498 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 TOP1P11387 765 aaKnown RBP16.93■□□□□ 0.3
UBXN1-209ENST00000528907 SREBF2Q12772 1141 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 MTMR2Q13614 643 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
UBXN1-209ENST00000528907 CLEC10AQ8IUN9 316 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 ENAHQ8N8S7 591 aaPredicted RBP16.93■□□□□ 0.3
UBXN1-209ENST00000528907 IGDCC4Q8TDY8 1250 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 LPAR1Q92633 364 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 SLC45A1Q9Y2W3 748 aa16.93■□□□□ 0.3
UBXN1-209ENST00000528907 PRC1O43663 620 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 LIFRP42702 1097 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-209ENST00000528907 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
UBXN1-209ENST00000528907 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 JAKMIP1Q96N16 626 aaKnown RBP16.92■□□□□ 0.3
UBXN1-209ENST00000528907 FEZ1Q99689 392 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 TMEM47Q9BQJ4 181 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 BEGAINQ9BUH8 593 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 AGXT2Q9BYV1 514 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
UBXN1-209ENST00000528907 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 ERICH2A1L162 156 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-209ENST00000528907 CCL15Q16663 113 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 RUFY3Q7L099 469 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
UBXN1-209ENST00000528907 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
UBXN1-209ENST00000528907 F5H6K3 240 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 SH2B2O14492 632 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-209ENST00000528907 IFIT3O14879 490 aaKnown RBP16.9■□□□□ 0.3
UBXN1-209ENST00000528907 WDR46O15213 610 aaKnown RBP16.9■□□□□ 0.3
UBXN1-209ENST00000528907 CASTP20810 708 aaKnown RBP16.9■□□□□ 0.3
UBXN1-209ENST00000528907 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
UBXN1-209ENST00000528907 HMGCS2P54868 508 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 KLRC3Q07444 240 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 WTAPQ15007 396 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 GMCL1Q96IK5 515 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 PTPN18Q99952 460 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 AGTPBP1Q9UPW5 1226 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
UBXN1-209ENST00000528907 AOC2O75106 756 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
UBXN1-209ENST00000528907 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
UBXN1-209ENST00000528907 IFNL1Q8IU54 200 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 ZIC5Q96T25 663 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 KIF2CQ99661 725 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 CFHR5Q9BXR6 569 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-209ENST00000528907 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
UBXN1-209ENST00000528907 BTBD19C9JJ37 291 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 NDUFB10O96000 172 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 VCAM1P19320 739 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.292e-10■■□□□ 13.9
UBXN1-209ENST00000528907 KIAA1755Q5JYT7 1200 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
UBXN1-209ENST00000528907 PNMA1Q8ND90 353 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 KAT14Q9H8E8 782 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 RLFQ13129 1914 aa16.88■□□□□ 0.29
UBXN1-209ENST00000528907 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBXN1-209ENST00000528907 PLA2G6O60733 806 aa16.87■□□□□ 0.29
UBXN1-209ENST00000528907 RCAN1P53805 252 aa16.87■□□□□ 0.29
UBXN1-209ENST00000528907 EVCP57679 992 aa16.87■□□□□ 0.29
UBXN1-209ENST00000528907 SLFN13Q68D06 897 aa16.87■□□□□ 0.29
UBXN1-209ENST00000528907 GADL1Q6ZQY3 521 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms