RNA–Protein interactions for RNA: ENST00000528906.5

PSMD13-208, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 858 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-208ENST00000528906 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
PSMD13-208ENST00000528906 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
PSMD13-208ENST00000528906 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
PSMD13-208ENST00000528906 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
PSMD13-208ENST00000528906 GRM4Q14833 912 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 WDR18Q9BV38 432 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 CSADQ9Y600 493 aa15.22■□□□□ 0.03
PSMD13-208ENST00000528906 PARP1P09874 1014 aaKnown RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 IFNAR1P17181 557 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 RXRAP19793 462 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 ADD1P35611 737 aaKnown RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 SHROOM1Q2M3G4 852 aaPredicted RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 ASPRV1Q53RT3 343 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 DLK2Q6UY11 383 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 ANKRD13AQ8IZ07 590 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 LRRC47Q8N1G4 583 aaKnown RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 NCOA5Q9HCD5 579 aaKnown RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 GOPCQ9HD26 462 aa15.21■□□□□ 0.03
PSMD13-208ENST00000528906 FAM217BQ9NTX9 383 aaPredicted RBP15.21■□□□□ 0.03
PSMD13-208ENST00000528906 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
PSMD13-208ENST00000528906 F5H6K3 240 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 SNHG28P0DPA3 235 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 PTPRAP18433 802 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 SMARCA1P28370 1054 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 CDC27P30260 824 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 KLRC3Q07444 240 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 ST3GAL1Q11201 340 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 PRKG1Q13976 671 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 GPATCH4Q5T3I0 446 aaKnown RBP15.2■□□□□ 0.02
PSMD13-208ENST00000528906 SLFN13Q68D06 897 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.2■□□□□ 0.02
PSMD13-208ENST00000528906 RAB11FIP4Q86YS3 637 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
PSMD13-208ENST00000528906 SMARCC2Q8TAQ2 1214 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
PSMD13-208ENST00000528906 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
PSMD13-208ENST00000528906 SSC5DA1L4H1 1573 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 A0A1W2PRG0 241 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 TRAF5O00463 557 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 PDHBP11177 359 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 PDCP20941 246 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 USP14P54578 494 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 SSRP1Q08945 709 aaKnown RBP15.19■□□□□ 0.02
PSMD13-208ENST00000528906 NTRK3Q16288 839 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 C2orf69Q8N8R5 385 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 ACER1Q8TDN7 264 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 KIAA1683Q9H0B3 1180 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 VCPKMTQ9H867 229 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 RBM27Q9P2N5 1060 aaKnown RBP15.19■□□□□ 0.02
PSMD13-208ENST00000528906 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
PSMD13-208ENST00000528906 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
PSMD13-208ENST00000528906 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 C19orf81C9J6K1 198 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 USP17L10C9JJH3 530 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 CTDNEP1O95476 244 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
PSMD13-208ENST00000528906 SLC1A4P43007 532 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
PSMD13-208ENST00000528906 ZNF543Q08ER8 600 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 VGLL4Q14135 290 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 LDLRAD1Q5T700 205 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 FAM184AQ8NB25 1140 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
PSMD13-208ENST00000528906 WASF1Q92558 559 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 LPAR1Q92633 364 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 FEZ1Q99689 392 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 GBA2Q9HCG7 927 aaPredicted RBP15.18■□□□□ 0.02
PSMD13-208ENST00000528906 MAD2L2Q9UI95 211 aa15.18■□□□□ 0.02
PSMD13-208ENST00000528906 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 KLRF2D3W0D1 207 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 FMNL1O95466 1100 aaPredicted RBP15.17■□□□□ 0.02
PSMD13-208ENST00000528906 NDUFB10O96000 172 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 GJB2P29033 226 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 ECE1P42892 770 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 BACE1P56817 501 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 PPATQ06203 517 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 SPP2Q13103 211 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 USP17L2Q6R6M4 530 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 ERO1BQ86YB8 467 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
PSMD13-208ENST00000528906 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 ORC3Q9UBD5 711 aaPredicted RBP15.17■□□□□ 0.02
PSMD13-208ENST00000528906 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 SNCAIPQ9Y6H5 919 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 STK36Q9NRP7 1315 aa15.17■□□□□ 0.02
PSMD13-208ENST00000528906 KIF3CO14782 793 aa15.16■□□□□ 0.02
PSMD13-208ENST00000528906 PRPF3O43395 683 aaKnown RBP15.16■□□□□ 0.02
PSMD13-208ENST00000528906 RAD21O60216 631 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms