RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 TFAP4Q01664 338 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 BLZF1Q9H2G9 400 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 SLC5A4Q9NY91 659 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.41□□□□□ -0.99e-8■□□□□ 10.6
CTNND1-219ENST00000528621 CTTNBP2NLQ9P2B4 639 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 RGS12O14924 1447 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 PAK2Q13177 524 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 PNOCQ13519 176 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 PPP2R5EQ16537 467 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 CFAP221Q4G0U5 840 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 OTUD7BQ6GQQ9 843 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 MCF2L2Q86YR7 1114 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 HACE1Q8IYU2 909 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 REXO1Q8N1G1 1221 aaKnown RBP9.41□□□□□ -0.9
CTNND1-219ENST00000528621 STIM2Q9P246 746 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 SMCO2A6NFE2 343 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 KIF11P52732 1056 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 MIER3Q7Z3K6 550 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 SMC1BQ8NDV3 1235 aa9.41□□□□□ -0.9
CTNND1-219ENST00000528621 LAD1O00515 517 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 EXOC3O60645 756 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 MAP7Q14244 749 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 DLGAP5Q15398 846 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 HERC4Q5GLZ8 1057 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 ADCY9O60503 1353 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 SH3BP5O60239 455 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 HECW2Q9P2P5 1572 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 BRD1O95696 1058 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 CFBP00751 764 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 ARHGEF16Q5VV41 709 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 GRK7Q8WTQ7 553 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 MRPL11Q9Y3B7 192 aaKnown RBP9.4□□□□□ -0.9
CTNND1-219ENST00000528621 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
CTNND1-219ENST00000528621 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-219ENST00000528621 GTF2A1P52655 376 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-219ENST00000528621 ATP11AP98196 1134 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 WHAMMP3Q1A5X7 153 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 BEND3Q5T5X7 828 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 TMC4Q7Z404 712 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 VPS52Q8N1B4 723 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.91
CTNND1-219ENST00000528621 KLHL30Q0D2K2 578 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 POTEDQ86YR6 584 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 RAB17Q9H0T7 212 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.91
CTNND1-219ENST00000528621 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.91
CTNND1-219ENST00000528621 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 KRT19P08727 400 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GBP1P32455 592 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GNPTABQ3T906 1256 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 PPFIBP2Q8ND30 876 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 RUNDC3BQ96NL0 473 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 FEZ2Q9UHY8 353 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 USTQ9Y2C2 406 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GOLGA6CA6NDK9 693 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GOLGA6BA6NDN3 693 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 JAK2O60674 1132 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GOLGA6DP0CG33 693 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CEP85LQ5SZL2 805 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 FAM102BQ5T8I3 360 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 IFNL3Q8IZI9 196 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■□□ 17.3
CTNND1-219ENST00000528621 GOLGA6AQ9NYA3 693 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CDC25BP30305 580 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 NT5C2P49902 561 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 KRT26Q7Z3Y9 468 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 STMN2Q93045 179 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 APBA3O96018 575 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 IRX3P78415 501 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 RPS6KA1Q15418 735 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 ME3Q16798 604 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 IPO4Q8TEX9 1081 aaKnown RBP9.39□□□□□ -0.91
CTNND1-219ENST00000528621 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
CTNND1-219ENST00000528621 GAS7O60861 476 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms