RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 PHIPQ8WWQ0 1821 aa25.76■■□□□ 1.71
PACSIN3-205ENST00000528462 KLF18A0A0U1RQI7 1052 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 USP17L10C9JJH3 530 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 DDAH1O94760 285 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 ECE1P42892 770 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 BACE1P56817 501 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 SPP2Q13103 211 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 PPIL2Q13356 520 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 TPCN1Q9ULQ1 816 aa25.75■■□□□ 1.71
PACSIN3-205ENST00000528462 C19orf81C9J6K1 198 aa25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 CXCL11O14625 94 aa25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 SYNE3Q6ZMZ3 975 aa25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 LRRC47Q8N1G4 583 aaKnown RBP25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 KCNH4Q9UQ05 1017 aa25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 MYH4Q9Y623 1939 aa25.74■■□□□ 1.71
PACSIN3-205ENST00000528462 CALM1P0DP23 149 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 CALM2P0DP24 149 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 CALM3P0DP25 149 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 SNHG28P0DPA3 235 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 PDIA3P30101 505 aaKnown RBP25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 OPTNQ96CV9 577 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 ZSCAN31Q96LW9 406 aaPredicted RBP25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 VCPKMTQ9H867 229 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 GOPCQ9HD26 462 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 NID2Q14112 1375 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 F5H6K3 240 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 ZBTB43O43298 467 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 USP14P54578 494 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 KLRC3Q07444 240 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 PPP2R5BQ15173 497 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 SH3D19Q5HYK7 790 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 CNKSR2Q8WXI2 1034 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 LPAR1Q92633 364 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 OTUD5Q96G74 571 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 FEZ1Q99689 392 aa25.73■■□□□ 1.71
PACSIN3-205ENST00000528462 IRF6O14896 467 aa25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 APLP1P51693 650 aa25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 GMCL1Q96IK5 515 aa25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 C12orf42Q96LP6 360 aa25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 SH2B1Q9NRF2 756 aaPredicted RBP25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 HPS5Q9UPZ3 1129 aa25.72■■□□□ 1.71
PACSIN3-205ENST00000528462 TRIM75PA6NK02 468 aa25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 ZBTB48P10074 688 aaPredicted RBP25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 PDHBP11177 359 aa25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 MTMR2Q13614 643 aa25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 CREBZFQ9NS37 354 aa25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 RBM19Q9Y4C8 960 aaKnown RBP25.71■■□□□ 1.71
PACSIN3-205ENST00000528462 GOLGA8BA8MQT2 603 aa25.7■■□□□ 1.71
PACSIN3-205ENST00000528462 NDUFB10O96000 172 aa25.7■■□□□ 1.71
PACSIN3-205ENST00000528462 ME3Q16798 604 aa25.7■■□□□ 1.71
PACSIN3-205ENST00000528462 LARP6Q9BRS8 491 aaKnown RBP25.7■■□□□ 1.71
PACSIN3-205ENST00000528462 PFKFB2O60825 505 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 GJA5P36382 358 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 RGMBQ6NW40 437 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 USP17L2Q6R6M4 530 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 MICU3Q86XE3 530 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 FANCBQ8NB91 859 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 DCAF4Q8WV16 495 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 WNK4Q96J92 1243 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 EMILIN3Q9NT22 766 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 A0A0G2JLL6 359 aaPredicted RBP25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 SPRYD7Q5W111 196 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 SLFN13Q68D06 897 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 PRRT2Q7Z6L0 340 aaPredicted RBP25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 TMX3Q96JJ7 454 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 MYL10Q9BUA6 226 aa25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 ABT1Q9ULW3 272 aaKnown RBP25.69■■□□□ 1.7
PACSIN3-205ENST00000528462 KIF5BP33176 963 aa25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 METAP2P50579 478 aaKnown RBP eCLIP25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 GRM4Q14833 912 aa25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 KIAA1755Q5JYT7 1200 aa25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 GPATCH4Q5T3I0 446 aaKnown RBP25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 NOL8Q76FK4 1167 aaKnown RBP25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 NUP133Q8WUM0 1156 aa25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 SLKQ9H2G2 1235 aaPredicted RBP25.68■■□□□ 1.7
PACSIN3-205ENST00000528462 CCDC196A0A1B0GTZ2 297 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 K7ELQ4 463 aaPredicted RBP25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 ZNF157P51786 506 aaPredicted RBP25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 ZNF543Q08ER8 600 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 SNAPC2Q13487 334 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 ASPRV1Q53RT3 343 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 RASAL3Q86YV0 1011 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 CTCFLQ8NI51 663 aaPredicted RBP25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 CHMP4CQ96CF2 233 aa25.67■■□□□ 1.7
PACSIN3-205ENST00000528462 PALM3A6NDB9 673 aaPredicted RBP25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 LARGE1O95461 756 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 SLC1A4P43007 532 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 HMGCS2P54868 508 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 HSCBQ8IWL3 235 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 PROCA1Q8NCQ7 364 aaPredicted RBP25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 CCDC102AQ96A19 550 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 FAM217BQ9NTX9 383 aaPredicted RBP25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 RBM28Q9NW13 759 aaKnown RBP25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 MAD2L2Q9UI95 211 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 NAP1L2Q9ULW6 460 aaPredicted RBP25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 PTPRFP10586 1907 aa25.66■■□□□ 1.7
PACSIN3-205ENST00000528462 GOLGA8AA7E2F4 631 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 WDR46O15213 610 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 PARP1P09874 1014 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 ANP32AP39687 249 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms