RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 DEFB118Q96PH6 123 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 NUDT12Q9BQG2 462 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 FSD1Q9BTV5 496 aa28.69■■■□□ 2.18
PACSIN3-204ENST00000528201 ROBO3Q96MS0 1386 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 MINDY4BA8MYZ0 360 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 EEF2P13639 858 aaKnown RBP28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 RASA1P20936 1047 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 ZMYM1Q5SVZ6 1142 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 TANGO6Q9C0B7 1094 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 VCPKMTQ9H867 229 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 ARHGEF10LQ9HCE6 1279 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 STAP2Q9UGK3 403 aa28.68■■■□□ 2.18
PACSIN3-204ENST00000528201 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.67■■■□□ 2.18
PACSIN3-204ENST00000528201 XRCC5P13010 732 aaKnown RBP28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 COG2Q14746 738 aa28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 CCL14Q16627 93 aa28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 CCAR1Q8IX12 1150 aaKnown RBP28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 EXOC6Q8TAG9 804 aa28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 LPAR1Q92633 364 aa28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 KANSL2Q9H9L4 492 aa28.66■■■□□ 2.18
PACSIN3-204ENST00000528201 PATL2C9JE40 543 aaKnown RBP28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 FOXP2O15409 715 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 GNAT2P19087 354 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 TDO2P48775 406 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 PDE1AP54750 535 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 ATP2B2Q01814 1243 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 MAP3K21Q5TCX8 1036 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 CRISPLD2Q9H0B8 497 aa28.65■■■□□ 2.18
PACSIN3-204ENST00000528201 APPP05067 770 aa28.64■■■□□ 2.18
PACSIN3-204ENST00000528201 CCNA1P78396 465 aa28.64■■■□□ 2.18
PACSIN3-204ENST00000528201 LRRFIP1Q32MZ4 808 aaKnown RBP28.64■■■□□ 2.18
PACSIN3-204ENST00000528201 IFNL3Q8IZI9 196 aa28.64■■■□□ 2.18
PACSIN3-204ENST00000528201 FARP2O94887 1054 aaPredicted RBP28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 CCDC129Q6ZRS4 1044 aa28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 LNPKQ9C0E8 428 aa28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 SH2D4AQ9H788 454 aa28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 HOXC10Q9NYD6 342 aa28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 ZBTB47Q9UFB7 747 aaPredicted RBP28.63■■■□□ 2.17
PACSIN3-204ENST00000528201 PRDM1O75626 825 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 IGHDP01880 384 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 TFRCP02786 760 aaKnown RBP28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 PRKAR2AP13861 404 aaKnown RBP28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 DSG3P32926 999 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 RGS2P41220 211 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 MAP2K5Q13163 448 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 WDR78Q5VTH9 848 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 SMC5Q8IY18 1101 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 ATG4CQ96DT6 458 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 APBA2Q99767 749 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 MOV10L1Q9BXT6 1211 aaKnown RBP28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 RPTORQ8N122 1335 aa28.62■■■□□ 2.17
PACSIN3-204ENST00000528201 WDR46O15213 610 aaKnown RBP28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 FLOT1O75955 427 aa28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 ZKSCAN1P17029 563 aaPredicted RBP28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 PTPREP23469 700 aa28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 AAMPQ13685 434 aa28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 MKNK2Q9HBH9 465 aa28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 FBXO28Q9NVF7 368 aa28.61■■■□□ 2.17
PACSIN3-204ENST00000528201 IGKV6D-41A0A0C4DH26 115 aa28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 GRB14Q14449 540 aa28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 SPATC1LQ9H0A9 340 aa28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 CWC22Q9HCG8 908 aaKnown RBP28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 HMX1Q9NP08 348 aaPredicted RBP28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 FLRT1Q9NZU1 646 aa28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 RLFQ13129 1914 aa28.6■■■□□ 2.17
PACSIN3-204ENST00000528201 SLC15A5A6NIM6 579 aa28.59■■■□□ 2.17
PACSIN3-204ENST00000528201 CACNB2Q08289 660 aaPredicted RBP28.59■■■□□ 2.17
PACSIN3-204ENST00000528201 EVI5LQ96CN4 794 aa28.59■■■□□ 2.17
PACSIN3-204ENST00000528201 H0YGN5 161 aa28.58■■■□□ 2.17
PACSIN3-204ENST00000528201 B4GALNT3Q6L9W6 998 aa28.58■■■□□ 2.17
PACSIN3-204ENST00000528201 SAMD1Q6SPF0 538 aaPredicted RBP28.58■■■□□ 2.17
PACSIN3-204ENST00000528201 DIS3LQ8TF46 1054 aaKnown RBP28.58■■■□□ 2.17
PACSIN3-204ENST00000528201 GREB1LQ9C091 1923 aaPredicted RBP28.58■■■□□ 2.17
PACSIN3-204ENST00000528201 MYH8P13535 1937 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 CEP290O15078 2479 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 ERCC3P19447 782 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 MNX1P50219 401 aaPredicted RBP28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 FAM83BQ5T0W9 1011 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 VPS53Q5VIR6 699 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 TRMT44Q8IYL2 757 aaKnown RBP28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 NPLOC4Q8TAT6 608 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 NUP88Q99567 741 aaPredicted RBP28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 NACAP1Q9BZK3 213 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 RWDD1Q9H446 243 aaPredicted RBP28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 NYAP2Q9P242 653 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 ADAMTS5Q9UNA0 930 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 A0A0G2JMZ2 1700 aa28.57■■■□□ 2.16
PACSIN3-204ENST00000528201 SLC34A2O95436 690 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 HOXC6P09630 235 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 CCND3P30281 292 aaPredicted RBP28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 TMEM132BQ14DG7 1078 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 MB21D1Q8N884 522 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 NAPBQ9H115 298 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 GOPCQ9HD26 462 aa28.56■■■□□ 2.16
PACSIN3-204ENST00000528201 PPARAQ07869 468 aa28.55■■■□□ 2.16
PACSIN3-204ENST00000528201 SHCBP1Q8NEM2 672 aa28.55■■■□□ 2.16
PACSIN3-204ENST00000528201 DPF3Q92784 378 aa28.55■■■□□ 2.16
PACSIN3-204ENST00000528201 PAWRQ96IZ0 340 aaKnown RBP28.55■■■□□ 2.16
PACSIN3-204ENST00000528201 FAM227BQ96M60 508 aa28.55■■■□□ 2.16
PACSIN3-204ENST00000528201 IVNS1ABPQ9Y6Y0 642 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms