RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 MPHOSPH10O00566 681 aaKnown RBP8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 MAPK4P31152 587 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 CDK8P49336 464 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 Q3C1V9 767 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 MORN1Q5T089 497 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 GPR142Q7Z601 462 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 GPRC5AQ8NFJ5 357 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 SEC62Q99442 399 aaKnown RBP8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 APBA2Q99767 749 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 CABP5Q9NP86 173 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 RABGAP1Q9Y3P9 1069 aa8.18□□□□□ -1.1
PPFIA1-209ENST00000527612 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 FARP2O94887 1054 aaPredicted RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 SGPL1O95470 568 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 IGHA2P01877 340 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 ZFYP08048 801 aaPredicted RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 XRCC5P13010 732 aaKnown RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 RASA1P20936 1047 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 GRB14Q14449 540 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 CCL14Q16627 93 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 SBK1Q52WX2 424 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 DIS3LQ8TF46 1054 aaKnown RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 LPAR1Q92633 364 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 DEFB118Q96PH6 123 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 VCPKMTQ9H867 229 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 BIN2Q9UBW5 565 aaPredicted RBP8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 TMX2Q9Y320 296 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
PPFIA1-209ENST00000527612 IGKV6D-41A0A0C4DH26 115 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 WDR46O15213 610 aaKnown RBP8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 EEF2P13639 858 aaKnown RBP8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 PRKAR2AP13861 404 aaKnown RBP8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 CYP2B6P20813 491 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 ZMYM1Q5SVZ6 1142 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 SPICE1Q8N0Z3 855 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 CCDC17Q96LX7 622 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 FSD1Q9BTV5 496 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 FLRT1Q9NZU1 646 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 STAP2Q9UGK3 403 aa8.16□□□□□ -1.1
PPFIA1-209ENST00000527612 RPTORQ8N122 1335 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 ERC2O15083 957 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 HOXC6P09630 235 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 ZKSCAN1P17029 563 aaPredicted RBP8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 RGS2P41220 211 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 PDE1AP54750 535 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 MAP2K5Q13163 448 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 CCDC129Q6ZRS4 1044 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 PLEKHH3Q7Z736 793 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 POTEDQ86YR6 584 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 SMC5Q8IY18 1101 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 AMOTL1Q8IY63 956 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 REPS2Q8NFH8 660 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 ATG4CQ96DT6 458 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 MOV10L1Q9BXT6 1211 aaKnown RBP8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 SPATC1LQ9H0A9 340 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 SH2D4AQ9H788 454 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 FBXO28Q9NVF7 368 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 VCANP13611 3396 aa8.15□□□□□ -1.1
PPFIA1-209ENST00000527612 PFASO15067 1338 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 A0A0D9SFI3 127 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 SLC15A5A6NIM6 579 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 H0YGN5 161 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 PRDM1O75626 825 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 FLOT1O75955 427 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 GNAT2P19087 354 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 PTPREP23469 700 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 CCND3P30281 292 aaPredicted RBP8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 DSG3P32926 999 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 TDO2P48775 406 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 CCNA1P78396 465 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 CACNB2Q08289 660 aaPredicted RBP8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 COG2Q14746 738 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 TMEM132BQ14DG7 1078 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 VPS53Q5VIR6 699 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 IFNL3Q8IZI9 196 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 MB21D1Q8N884 522 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 ANKLE1Q8NAG6 615 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 SHCBP1Q8NEM2 672 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 CEP95Q96GE4 821 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 PRO3102Q9H379 93 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 KANSL2Q9H9L4 492 aa8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 ZNF214Q9UL59 606 aaPredicted RBP8.14□□□□□ -1.11
PPFIA1-209ENST00000527612 OGDHLQ9ULD0 1010 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms