RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 USP17L13C9JLJ4 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L11C9JVI0 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L18D6R9N7 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L22D6RA61 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L17D6RBQ6 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L19D6RCP7 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L20D6RJB6 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 SGSM2O43147 1006 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 TSPY3P0CV98 308 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 TSPY8P0CW00 308 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 PTH1RQ03431 593 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 USP17L24Q0WX57 530 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 NYAP2Q9P242 653 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 NEDD4P46934 1319 aa23.07■■□□□ 1.28
TTC39A-215ENST00000527205 ORC4O43929 436 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 NMT2O60551 498 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 PSMC4P43686 418 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 FAM110CQ1W6H9 321 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 BMP2KLQ5H9B9 411 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 MTMR4Q9NYA4 1195 aa23.06■■□□□ 1.28
TTC39A-215ENST00000527205 CNMDO75829 334 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 GCLCP48506 637 aaPredicted RBP23.05■■□□□ 1.28
TTC39A-215ENST00000527205 RRP12Q5JTH9 1297 aaKnown RBP23.05■■□□□ 1.28
TTC39A-215ENST00000527205 FBXO46Q6PJ61 603 aaPredicted RBP23.05■■□□□ 1.28
TTC39A-215ENST00000527205 LRRC47Q8N1G4 583 aaKnown RBP23.05■■□□□ 1.28
TTC39A-215ENST00000527205 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 SH2D4AQ9H788 454 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 IL17RBQ9NRM6 502 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 RBPJLQ9UBG7 517 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 MORF4L1Q9UBU8 362 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 CLIP2Q9UDT6 1046 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 PTPN22Q9Y2R2 807 aa23.05■■□□□ 1.28
TTC39A-215ENST00000527205 TSPY2A6NKD2 308 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 SPDYE16A6NNV3 312 aaPredicted RBP23.04■■□□□ 1.28
TTC39A-215ENST00000527205 RANBP6O60518 1105 aaKnown RBP23.04■■□□□ 1.28
TTC39A-215ENST00000527205 KIF22Q14807 665 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 AKNAD1Q5T1N1 836 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 RUFY2Q8WXA3 655 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 TOMM22Q9NS69 142 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 HPS5Q9UPZ3 1129 aa23.04■■□□□ 1.28
TTC39A-215ENST00000527205 CAPN15O75808 1086 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 PKN2Q16513 984 aaKnown RBP23.03■■□□□ 1.28
TTC39A-215ENST00000527205 Q3C1V9 767 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 LPAR1Q92633 364 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 NUP88Q99567 741 aaPredicted RBP23.03■■□□□ 1.28
TTC39A-215ENST00000527205 PAGR1Q9BTK6 254 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 TANGO6Q9C0B7 1094 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 PTCH2Q9Y6C5 1203 aa23.03■■□□□ 1.28
TTC39A-215ENST00000527205 ZNF213O14771 459 aa23.02■■□□□ 1.28
TTC39A-215ENST00000527205 WDR46O15213 610 aaKnown RBP23.02■■□□□ 1.28
TTC39A-215ENST00000527205 RAD21O60216 631 aa23.02■■□□□ 1.28
TTC39A-215ENST00000527205 FAM83BQ5T0W9 1011 aa23.02■■□□□ 1.28
TTC39A-215ENST00000527205 RASGRP2Q7LDG7 609 aa23.02■■□□□ 1.28
TTC39A-215ENST00000527205 GABRQQ9UN88 632 aa23.02■■□□□ 1.28
TTC39A-215ENST00000527205 FMNL1O95466 1100 aaPredicted RBP23.01■■□□□ 1.27
TTC39A-215ENST00000527205 TTLL1O95922 423 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 NDUFB10O96000 172 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 MKL1Q969V6 931 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 ESYT1Q9BSJ8 1104 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 GOPCQ9HD26 462 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 FBXO28Q9NVF7 368 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 BTBD7Q9P203 1132 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 TAF6LQ9Y6J9 622 aa23.01■■□□□ 1.27
TTC39A-215ENST00000527205 F5H6K3 240 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 FCGRTP55899 365 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 ERVK-9P63128 1117 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 ERVK-24P63145 666 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 KLRC3Q07444 240 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 IFFO2Q5TF58 517 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 LBX2Q6XYB7 198 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 MFSD6Q6ZSS7 791 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 SRRDQ9UH36 339 aa23■■□□□ 1.27
TTC39A-215ENST00000527205 ZNFX1Q9P2E3 1918 aaKnown RBP23■■□□□ 1.27
TTC39A-215ENST00000527205 DSG3P32926 999 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 NOVP48745 357 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 PRKCZQ05513 592 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 IMMTQ16891 758 aaKnown RBP22.99■■□□□ 1.27
TTC39A-215ENST00000527205 CHMP4CQ96CF2 233 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 ATG4CQ96DT6 458 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 PORCNQ9H237 461 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 MYPNQ86TC9 1320 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 RBBP6Q7Z6E9 1792 aaKnown RBP22.99■■□□□ 1.27
TTC39A-215ENST00000527205 CENPFP49454 3210 aa22.99■■□□□ 1.27
TTC39A-215ENST00000527205 FLOT1O75955 427 aa22.98■■□□□ 1.27
TTC39A-215ENST00000527205 COG2Q14746 738 aa22.98■■□□□ 1.27
TTC39A-215ENST00000527205 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
TTC39A-215ENST00000527205 GTF3C2Q8WUA4 911 aaPredicted RBP22.98■■□□□ 1.27
TTC39A-215ENST00000527205 LSG1Q9H089 658 aaKnown RBP22.98■■□□□ 1.27
TTC39A-215ENST00000527205 CTNNA3Q9UI47 895 aa22.98■■□□□ 1.27
TTC39A-215ENST00000527205 STX8Q9UNK0 236 aa22.98■■□□□ 1.27
TTC39A-215ENST00000527205 RABGAP1Q9Y3P9 1069 aa22.98■■□□□ 1.27
TTC39A-215ENST00000527205 B4E1Z4 1266 aa22.97■■□□□ 1.27
TTC39A-215ENST00000527205 TNPO2O14787 897 aaKnown RBP22.97■■□□□ 1.27
TTC39A-215ENST00000527205 CYP21A2P08686 494 aa22.97■■□□□ 1.27
TTC39A-215ENST00000527205 ARHGEF6Q15052 776 aa22.97■■□□□ 1.27
TTC39A-215ENST00000527205 GPRC5AQ8NFJ5 357 aa22.97■■□□□ 1.27
TTC39A-215ENST00000527205 ZKSCAN3Q9BRR0 538 aa22.97■■□□□ 1.27
TTC39A-215ENST00000527205 RNF41Q9H4P4 317 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms