RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ATP2B2Q01814 1243 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 MTMR2Q13614 643 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 RABEP1Q15276 862 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 Q6ZUG5 572 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 PRRT2Q7Z6L0 340 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-205ENST00000526954 TCEANC2Q96MN5 208 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 LRRC2Q9BYS8 371 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 GPHNQ9NQX3 736 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-205ENST00000526954 PDRG1Q9NUG6 133 aa19.39■□□□□ 0.69
CAPN1-205ENST00000526954 LOC285556D6RIA3 1793 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 NEK4P51957 841 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 GTF2A2P52657 109 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 SNAPC2Q13487 334 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 SGMS1Q86VZ5 419 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 GMCL1P1Q8NEA9 526 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 MS4A4AQ96JQ5 239 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 C12orf42Q96LP6 360 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 FEZ1Q99689 392 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 VCPKMTQ9H867 229 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 SENP2Q9HC62 589 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 GOPCQ9HD26 462 aa19.38■□□□□ 0.69
CAPN1-205ENST00000526954 LPAR1Q92633 364 aa19.37■□□□□ 0.69
CAPN1-205ENST00000526954 KAT14Q9H8E8 782 aa19.37■□□□□ 0.69
CAPN1-205ENST00000526954 EMILIN3Q9NT22 766 aa19.37■□□□□ 0.69
CAPN1-205ENST00000526954 F5H6K3 240 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 HMGCS2P54868 508 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 EVCP57679 992 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 FGD1P98174 961 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 KLRC3Q07444 240 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 MOGSQ13724 837 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 TOB2Q14106 344 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-205ENST00000526954 CYP4F22Q6NT55 531 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 LRRC47Q8N1G4 583 aaKnown RBP19.36■□□□□ 0.69
CAPN1-205ENST00000526954 PROCA1Q8NCQ7 364 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-205ENST00000526954 PNMA1Q8ND90 353 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 CAPNS2Q96L46 248 aa19.36■□□□□ 0.69
CAPN1-205ENST00000526954 TESPA1A2RU30 521 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-205ENST00000526954 MANSC4A6NHS7 340 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-205ENST00000526954 CETPP11597 493 aa19.35■□□□□ 0.69
CAPN1-205ENST00000526954 MKRN3Q13064 507 aaKnown RBP19.35■□□□□ 0.69
CAPN1-205ENST00000526954 KIAA1755Q5JYT7 1200 aa19.35■□□□□ 0.69
CAPN1-205ENST00000526954 FASTKD5Q7L8L6 764 aaKnown RBP19.35■□□□□ 0.69
CAPN1-205ENST00000526954 BRF1Q92994 677 aa19.35■□□□□ 0.69
CAPN1-205ENST00000526954 TMOD4Q9NZQ9 345 aa19.35■□□□□ 0.69
CAPN1-205ENST00000526954 CCDC69A6NI79 296 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 NDUFB10O96000 172 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 SNHG28P0DPA3 235 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 INHBEP58166 350 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 HTRA3P83110 453 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 NOGQ13253 232 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 ZYXQ15942 572 aaKnown RBP19.34■□□□□ 0.69
CAPN1-205ENST00000526954 SLFN13Q68D06 897 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 NFXL1Q6ZNB6 911 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 PAXIP1Q6ZW49 1069 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-205ENST00000526954 CATIPQ7Z7H3 387 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 ZNF654Q8IZM8 581 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 GMCL1Q96IK5 515 aa19.34■□□□□ 0.69
CAPN1-205ENST00000526954 DDAH1O94760 285 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 RCAN1P53805 252 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 TROAPQ12815 778 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 DCAF4Q8WV16 495 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 MAP3K14Q99558 947 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
CAPN1-205ENST00000526954 WDR33Q9C0J8 1336 aaKnown RBP19.32■□□□□ 0.68
CAPN1-205ENST00000526954 CCL15-CCL14A0A0B4J2E2 113 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 WDR46O15213 610 aaKnown RBP19.32■□□□□ 0.68
CAPN1-205ENST00000526954 CALM1P0DP23 149 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 CALM2P0DP24 149 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 CALM3P0DP25 149 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 PDHBP11177 359 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 VCAM1P19320 739 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 VEGFBP49765 207 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 AK2P54819 239 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 DGKZQ13574 1117 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 CCL15Q16663 113 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 APOA5Q6Q788 366 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 REM2Q8IYK8 340 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-205ENST00000526954 BRI3BPQ8WY22 251 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 THSD7BQ9C0I4 1608 aa19.32■□□□□ 0.68
CAPN1-205ENST00000526954 PARP14Q460N5 1801 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 ST18O60284 1047 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 TM4SF4P48230 202 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 GPAT2Q6NUI2 795 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 SYNE3Q6ZMZ3 975 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 GADL1Q6ZQY3 521 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 SPICE1Q8N0Z3 855 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 ZNF274Q96GC6 653 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-205ENST00000526954 AGTPBP1Q9UPW5 1226 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 SLC45A1Q9Y2W3 748 aa19.31■□□□□ 0.68
CAPN1-205ENST00000526954 ZBTB43O43298 467 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 RAD21O60216 631 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 BMP3P12645 472 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 HOXA7P31268 230 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-205ENST00000526954 MAP2K2P36507 400 aa19.3■□□□□ 0.68
CAPN1-205ENST00000526954 SLC1A4P43007 532 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms