RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 USP14P54578 494 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 MOGSQ13724 837 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 WTAPQ15007 396 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 RABEP1Q15276 862 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 SH2D4AQ9H788 454 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 GPHNQ9NQX3 736 aaPredicted RBP16.47■□□□□ 0.23
UBXN1-205ENST00000525004 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
UBXN1-205ENST00000525004 F5H6K3 240 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 SNHG28P0DPA3 235 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 GTF2A2P52657 109 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 KLRC3Q07444 240 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 SNAPC2Q13487 334 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 TOB2Q14106 344 aaPredicted RBP16.46■□□□□ 0.23
UBXN1-205ENST00000525004 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
UBXN1-205ENST00000525004 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 Q6ZUG5 572 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 LPAR1Q92633 364 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.23
UBXN1-205ENST00000525004 PARP14Q460N5 1801 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 RLFQ13129 1914 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 TRIM75PA6NK02 468 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 NEK4P51957 841 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 TROAPQ12815 778 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 MTMR2Q13614 643 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
UBXN1-205ENST00000525004 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 GOPCQ9HD26 462 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
UBXN1-205ENST00000525004 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
UBXN1-205ENST00000525004 RCAN1P53805 252 aa16.44■□□□□ 0.22
UBXN1-205ENST00000525004 INHBEP58166 350 aa16.44■□□□□ 0.22
UBXN1-205ENST00000525004 CYP4F22Q6NT55 531 aa16.44■□□□□ 0.22
UBXN1-205ENST00000525004 FASTKD5Q7L8L6 764 aaKnown RBP16.44■□□□□ 0.22
UBXN1-205ENST00000525004 CETPP11597 493 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-205ENST00000525004 TM4SF4P48230 202 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 HMGCS2P54868 508 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 NOGQ13253 232 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 LRRC47Q8N1G4 583 aaKnown RBP16.43■□□□□ 0.22
UBXN1-205ENST00000525004 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 CAPNS2Q96L46 248 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 FEZ1Q99689 392 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 BRPF3Q9ULD4 1205 aa16.43■□□□□ 0.22
UBXN1-205ENST00000525004 THSD7BQ9C0I4 1608 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
UBXN1-205ENST00000525004 PLA2G6O60733 806 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 DDAH1O94760 285 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 NDUFB10O96000 172 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 PDHBP11177 359 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 MAP2K2P36507 400 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 AK2P54819 239 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 HTRA3P83110 453 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 ANKRD1Q15327 319 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 APOA5Q6Q788 366 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
UBXN1-205ENST00000525004 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 BRI3BPQ8WY22 251 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 BRF1Q92994 677 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
UBXN1-205ENST00000525004 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
UBXN1-205ENST00000525004 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
UBXN1-205ENST00000525004 NID2Q14112 1375 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 CCDC69A6NI79 296 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 VCAM1P19320 739 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 VEGFBP49765 207 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 CATIPQ7Z7H3 387 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 ZIC5Q96T25 663 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 PTPN18Q99952 460 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
UBXN1-205ENST00000525004 TMOD4Q9NZQ9 345 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
UBXN1-205ENST00000525004 SLC12A7Q9Y666 1083 aa16.41■□□□□ 0.22
UBXN1-205ENST00000525004 BAZ2BQ9UIF8 2168 aaKnown RBP16.41■□□□□ 0.22
UBXN1-205ENST00000525004 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 PALM3A6NDB9 673 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-205ENST00000525004 CALM1P0DP23 149 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 CALM2P0DP24 149 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 CALM3P0DP25 149 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 FGD1P98174 961 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 DGKZQ13574 1117 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 GRM4Q14833 912 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 CCL15Q16663 113 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
UBXN1-205ENST00000525004 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms