RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 RASGRF1Q13972 1273 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 ZNF654Q8IZM8 581 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 FANCBQ8NB91 859 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 PSMB7Q99436 277 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 MTRQ99707 1265 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 TRIM75PA6NK02 468 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 ERLIN1O75477 346 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 KLK7P49862 253 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 UBXN1Q04323 297 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 SLC20A2Q08357 652 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 DNAJC21Q5F1R6 531 aaKnown RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 CDKAL1Q5VV42 579 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 DRC1Q96MC2 740 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 EIF3CLB5ME19 914 aaKnown RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 PATL2C9JE40 543 aaKnown RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 FILIP1LQ4L180 1135 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 EIF3CQ99613 913 aaKnown RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 XDHP47989 1333 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 NKRFO15226 690 aaKnown RBP eCLIP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 ERCC5P28715 1186 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 MCM7P33993 719 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 BCAMP50895 628 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 PPARAQ07869 468 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 FOXP1Q9H334 677 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-202ENST00000524773 SMARCAL1Q9NZC9 954 aa14.88□□□□□ -0.03
CAPN1-202ENST00000524773 EIF3JO75822 258 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 SYF2O95926 243 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 USP5P45974 858 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 PTGDRQ13258 359 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 SMCR8Q8TEV9 937 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 TRMT112Q9UI30 125 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 MTMR7Q9Y216 660 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 WDR19Q8NEZ3 1342 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 ECM29Q5VYK3 1845 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 RCCD1A6NED2 376 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 NMT2O60551 498 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 PDE8BO95263 885 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 DEXIO95424 95 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 LIFRP42702 1097 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 MATR3P43243 847 aaKnown RBP eCLIP14.87□□□□□ -0.034e-6■□□□□ 9.5
CAPN1-202ENST00000524773 PMS1P54277 932 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 CYP27A1Q02318 531 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 UBE3CQ15386 1083 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 ADGRA1Q86SQ6 560 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 SPATA5Q8NB90 893 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 ZCRB1Q8TBF4 217 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 HNRNPLLQ8WVV9 542 aaKnown RBP14.87□□□□□ -0.03
CAPN1-202ENST00000524773 TJP1Q07157 1748 aa14.87□□□□□ -0.03
CAPN1-202ENST00000524773 TTC26A0AVF1 554 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 ANKRD18BA2A2Z9 1011 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 PP2D1A8MPX8 630 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 IRS4O14654 1257 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-202ENST00000524773 MYO1BO43795 1136 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 NOP2P46087 812 aaKnown RBP14.86□□□□□ -0.03
CAPN1-202ENST00000524773 COPB1P53618 953 aaKnown RBP14.86□□□□□ -0.03
CAPN1-202ENST00000524773 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 GNL3LQ9NVN8 582 aaKnown RBP14.86□□□□□ -0.03
CAPN1-202ENST00000524773 A0A0G2JS52 829 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 ERICH2A1L162 156 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 MACROD2A1Z1Q3 448 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 CSF1RP07333 972 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 ZBTB38Q8NAP3 1195 aaPredicted RBP14.86□□□□□ -0.03
CAPN1-202ENST00000524773 UBAC1Q9BSL1 405 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 ABCF2Q9UG63 623 aa14.86□□□□□ -0.03
CAPN1-202ENST00000524773 TNKSO95271 1327 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 KCNJ18B7U540 433 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 GGCXP38435 758 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 AMPD2Q01433 879 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 C2orf54Q08AI8 447 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 KCNJ12Q14500 433 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 PKN1Q16512 942 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 IL17AQ16552 155 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 PIK3AP1Q6ZUJ8 805 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 VGLL2Q8N8G2 317 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 LACRTQ9GZZ8 138 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 PSD3Q9NYI0 1048 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 PDE2AO00408 941 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-202ENST00000524773 PCCAP05165 728 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-202ENST00000524773 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
CAPN1-202ENST00000524773 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 TRIML1Q8N9V2 468 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 RASGRP4Q8TDF6 673 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 WASF1Q92558 559 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 EHD2Q9NZN4 543 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 EPN1Q9Y6I3 576 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-202ENST00000524773 CTSWP56202 376 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 E2F4Q16254 413 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 CCDC122Q5T0U0 273 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 HDAC7Q8WUI4 952 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 AGPAT5Q9NUQ2 364 aa14.85□□□□□ -0.03
CAPN1-202ENST00000524773 TTF2Q9UNY4 1162 aaKnown RBP14.85□□□□□ -0.03
CAPN1-202ENST00000524773 NDUFA10O95299 355 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 PRCPP42785 496 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 HERVK_113P62684 666 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms