RNA–Protein interactions for RNA: ENST00000524661.5

PGAP2-228, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3

Gene PGAP2, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-228ENST00000524661 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
PGAP2-228ENST00000524661 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 CCDC196A0A1B0GTZ2 297 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 UBE2Q2LH0YL09 131 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 TNRC18O15417 2968 aaPredicted RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 DTNBO60941 627 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 DDAH1O94760 285 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 BRD1O95696 1058 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 AKR1B1P15121 316 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 SYT1P21579 422 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 TNNI2P48788 182 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 PKP1Q13835 747 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 RCSD1Q6JBY9 416 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 FAM83AQ86UY5 434 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 FAM184AQ8NB25 1140 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 TNPO1Q92973 898 aaKnown RBP10.89□□□□□ -0.67
PGAP2-228ENST00000524661 DDX11Q96FC9 970 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 CCDC17Q96LX7 622 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 CFHR5Q9BXR6 569 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 KAT14Q9H8E8 782 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 NID2Q14112 1375 aa10.89□□□□□ -0.67
PGAP2-228ENST00000524661 ECM29Q5VYK3 1845 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 LAMB1P07942 1786 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 STX6O43752 255 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 ALDH1A1P00352 501 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
PGAP2-228ENST00000524661 INHBEP58166 350 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 PPP2R5BQ15173 497 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 METTL16Q86W50 562 aaKnown RBP10.88□□□□□ -0.67
PGAP2-228ENST00000524661 FANCBQ8NB91 859 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 ZNF296Q8WUU4 475 aaPredicted RBP10.88□□□□□ -0.67
PGAP2-228ENST00000524661 HERC5Q9UII4 1024 aaKnown RBP10.88□□□□□ -0.67
PGAP2-228ENST00000524661 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 PLIN4Q96Q06 1357 aa10.88□□□□□ -0.67
PGAP2-228ENST00000524661 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
PGAP2-228ENST00000524661 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 GPR25O00155 361 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 CDC27P30260 824 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 TROAPQ12815 778 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 RASA3Q14644 834 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 CERKLQ49MI3 558 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 PRPF38BQ5VTL8 546 aaKnown RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 TATDN1Q6P1N9 297 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 FBXO46Q6PJ61 603 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 MOB2Q70IA6 237 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 TMEM39BQ9GZU3 492 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 DNAJC18Q9H819 358 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 ORC3Q9UBD5 711 aaPredicted RBP10.87□□□□□ -0.67
PGAP2-228ENST00000524661 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
PGAP2-228ENST00000524661 IGKV6D-41A0A0C4DH26 115 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 VPS37CA5D8V6 355 aaPredicted RBP10.86□□□□□ -0.67
PGAP2-228ENST00000524661 UNCXA6NJT0 531 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 H3BQV1 296 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 FKTNO75072 461 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 PPFIA3O75145 1194 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 SLURP2P0DP57 97 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
PGAP2-228ENST00000524661 KIF5BP33176 963 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 NOVP48745 357 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 LDLRAD1Q5T700 205 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 PRAMEF18Q5VWM3 479 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
PGAP2-228ENST00000524661 GBP4Q96PP9 640 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.86□□□□□ -0.67
PGAP2-228ENST00000524661 MTMR4Q9NYA4 1195 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
PGAP2-228ENST00000524661 MTMR6Q9Y217 621 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 PDE4DIPQ5VU43 2346 aa10.86□□□□□ -0.67
PGAP2-228ENST00000524661 STK36Q9NRP7 1315 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 TBC1D12O60347 775 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
PGAP2-228ENST00000524661 TTLL1O95922 423 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
PGAP2-228ENST00000524661 IFNAR1P17181 557 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 GNAQP50148 359 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 SSRP1Q08945 709 aaKnown RBP10.85□□□□□ -0.67
PGAP2-228ENST00000524661 GRM4Q14833 912 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 NFKBIBQ15653 356 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 NTRK3Q16288 839 aa10.85□□□□□ -0.67
PGAP2-228ENST00000524661 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms