RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ADAMTS6Q9UKP5 1117 aa8.73□□□□□ -1.01
SKP1-213ENST00000524288 SLITRK5O94991 958 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 ZNF865P0CJ78 1059 aaPredicted RBP8.72□□□□□ -1.01
SKP1-213ENST00000524288 OGFOD2Q6N063 350 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 PRKAG3Q9UGI9 489 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
SKP1-213ENST00000524288 CORINQ9Y5Q5 1042 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 PITPNM2Q9BZ72 1349 aa8.72□□□□□ -1.01
SKP1-213ENST00000524288 BTBD11A6QL63 1104 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 GFRA2O00451 464 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 KLF4O43474 513 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
SKP1-213ENST00000524288 SERINC3Q13530 473 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 SFRP5Q5T4F7 317 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 NOP9Q86U38 636 aaKnown RBP8.71□□□□□ -1.02
SKP1-213ENST00000524288 ANTXR1Q9H6X2 564 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 LMCD1Q9NZU5 365 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 ZNRF3Q9ULT6 936 aa8.71□□□□□ -1.02
SKP1-213ENST00000524288 TPX2Q9ULW0 747 aaKnown RBP8.71□□□□□ -1.02
SKP1-213ENST00000524288 CDK11AQ9UQ88 783 aaPredicted RBP8.71□□□□□ -1.02
SKP1-213ENST00000524288 GRK4P32298 578 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 IKZF1Q13422 519 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 NKG7Q16617 165 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 LETMD1Q6P1Q0 360 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
SKP1-213ENST00000524288 MFSD4AQ8N468 514 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 FLAD1Q8NFF5 587 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 MIPEPQ99797 713 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 ST7Q9NRC1 585 aa8.7□□□□□ -1.02
SKP1-213ENST00000524288 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
SKP1-213ENST00000524288 CYP7A1P22680 504 aa8.69□□□□□ -1.02
SKP1-213ENST00000524288 GIPRP48546 466 aa8.69□□□□□ -1.02
SKP1-213ENST00000524288 RAB33AQ14088 237 aa8.69□□□□□ -1.02
SKP1-213ENST00000524288 PPP2R5EQ16537 467 aa8.69□□□□□ -1.02
SKP1-213ENST00000524288 MRPL41Q8IXM3 137 aaKnown RBP8.69□□□□□ -1.02
SKP1-213ENST00000524288 CELF2-AS1Q8N7Q2 184 aa8.69□□□□□ -1.02
SKP1-213ENST00000524288 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
SKP1-213ENST00000524288 FAM155AB1AL88 458 aaPredicted RBP8.68□□□□□ -1.02
SKP1-213ENST00000524288 KIR3DL1P43629 444 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 ZP2Q05996 745 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 PDE4BQ07343 736 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 PRAMEF13Q5VWM6 474 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 JAZF1Q86VZ6 243 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 REXO1Q8N1G1 1221 aaKnown RBP8.68□□□□□ -1.02
SKP1-213ENST00000524288 MRFAP1L1Q96HT8 127 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 ACTR10Q9NZ32 417 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 ADAM30Q9UKF2 790 aa8.68□□□□□ -1.02
SKP1-213ENST00000524288 TMA7Q9Y2S6 64 aaKnown RBP8.68□□□□□ -1.02
SKP1-213ENST00000524288 HTR3BO95264 441 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
SKP1-213ENST00000524288 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 THAP5Q7Z6K1 395 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 ARID1BQ8NFD5 2236 aaPredicted RBP8.67□□□□□ -1.02
SKP1-213ENST00000524288 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 FAM168AQ92567 244 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
SKP1-213ENST00000524288 CARMIL2Q6F5E8 1435 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 EHMT1Q9H9B1 1298 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 SEMA3GQ9NS98 782 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 SNTG2Q9NY99 539 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 CAPN6Q9Y6Q1 641 aa8.66□□□□□ -1.02
SKP1-213ENST00000524288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
SKP1-213ENST00000524288 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 TLDC2A0PJX2 215 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 FAM221BA6H8Z2 402 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 PGRP06401 933 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 PLCG1P19174 1290 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 HSPA12BQ96MM6 686 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 REV1Q9UBZ9 1251 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 TBX22Q9Y458 520 aa8.65□□□□□ -1.02
SKP1-213ENST00000524288 MRPL42Q9Y6G3 142 aaKnown RBP8.65□□□□□ -1.02
SKP1-213ENST00000524288 PRR33A8MZF0 331 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 IMPDH2P12268 514 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 ETV3P41162 512 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 MCATQ8IVS2 390 aaKnown RBP8.64□□□□□ -1.03
SKP1-213ENST00000524288 NLGN1Q8N2Q7 840 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 DEPDC7Q96QD5 511 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 TJP2Q9UDY2 1190 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 KLHL3Q9UH77 587 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
SKP1-213ENST00000524288 B2RBV5 119 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 DNAJA2O60884 412 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 ATE1O95260 518 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 RASA3Q14644 834 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 OVOS1Q6IE37 1185 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 OR6P1Q8NGX9 317 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 PIWIL2Q8TC59 973 aaKnown RBP8.63□□□□□ -1.03
SKP1-213ENST00000524288 CCDC120Q96HB5 630 aa8.63□□□□□ -1.03
SKP1-213ENST00000524288 C8AP07357 584 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms