RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	NBPF11	Q86T75	865 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	LUZP1	Q86V48	1076 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	DGKH	Q86XP1	1220 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	C2CD5	Q86YS7	1000 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	PNMA1	Q8ND90	353 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	LZTS2	Q9BRK4	669 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	VPS54	Q9P1Q0	977 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	POLL	Q9UGP5	575 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	FLT1	P17948	1338 aa		12.35	□□□□□ -0.43
SPIDR-222	ENST00000524006	GPR75-ASB3	A0A0A6YYF3	556 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	KLRG2	A4D1S0	409 aa	Predicted RBP	12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006		H0YIN7	160 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	ZNF202	O95125	648 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	HLA-DOA	P06340	250 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	SRGN	P10124	158 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	SCG2	P13521	617 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	GUCY1A2	P33402	732 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	RASSF7	Q02833	373 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	FSTL1	Q12841	308 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	GRM4	Q14833	912 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	OLFM4	Q6UX06	510 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	ENGASE	Q8NFI3	743 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	TIGD1	Q96MW7	591 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	MAP3K14	Q99558	947 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	TRIM34	Q9BYJ4	488 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	RRAGC	Q9HB90	399 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	STX8	Q9UNK0	236 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006		V9GY48	417 aa	Predicted RBP	12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	ZNF646	O15015	1829 aa	Predicted RBP	12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006	GAK	O14976	1311 aa		12.34	□□□□□ -0.43
SPIDR-222	ENST00000524006		F8W031	263 aa	Predicted RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	NMT2	O60551	498 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	TROAP	Q12815	778 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	PICALM	Q13492	652 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	SNW1	Q13573	536 aa	Known RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	PPP4R3B	Q5MIZ7	849 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	STYK1	Q6J9G0	422 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	TEKT1	Q969V4	418 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	DYNLL2	Q96FJ2	89 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	SEC63	Q9UGP8	760 aa	Known RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	DACH1	Q9UI36	760 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	TTF2	Q9UNY4	1162 aa	Known RBP	12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	MTMR7	Q9Y216	660 aa		12.33	□□□□□ -0.44
SPIDR-222	ENST00000524006	SNED1	Q8TER0	1413 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	SMTNL1	A8MU46	457 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	PTPA	Q15257	358 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	RESP18	Q5W5W9	173 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	KANK3	Q6NY19	840 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	C16orf86	Q6ZW13	317 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	CNNM3	Q8NE01	707 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	PIBF1	Q8WXW3	757 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	CNKSR1	Q969H4	720 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	KLRG1	Q96E93	195 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	PHF20	Q9BVI0	1012 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	CABP5	Q9NP86	173 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	TCP11L1	Q9NUJ3	509 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	KIAA1468	Q9P260	1216 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	KCNH3	Q9ULD8	1083 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	DAGLA	Q9Y4D2	1042 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	SCN9A	Q15858	1988 aa		12.32	□□□□□ -0.44
SPIDR-222	ENST00000524006	GREB1L	Q9C091	1923 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	CCDC194	A0A1B0GVG4	234 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	hCG_1642624	A0A1W2PR95	340 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SMIM22	K7EJ46	135 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	PARP1	P09874	1014 aa	Known RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	TOP1	P11387	765 aa	Known RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	TXLNA	P40222	546 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	CDK8	P49336	464 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	NLRP12	P59046	1061 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	NR5A1	Q13285	461 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	PFKFB3	Q16875	520 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	DOK7	Q18PE1	504 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	TTC38	Q5R3I4	469 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SOGA3	Q5TF21	947 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SLC51A	Q86UW1	340 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	AOPEP	Q8N6M6	819 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SPC24	Q8NBT2	197 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SUPT20H	Q8NEM7	779 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	FERMT2	Q96AC1	680 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	FAM163A	Q96GL9	167 aa	Predicted RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	PYM1	Q9BRP8	204 aa	Known RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SH3GLB2	Q9NR46	395 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SWAP70	Q9UH65	585 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	WDR90	Q96KV7	1748 aa		12.31	□□□□□ -0.44
SPIDR-222	ENST00000524006	SBF1	O95248	1867 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	UBE2Q2L	H0YL09	131 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	NRDC	O43847	1150 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	SMC2	O95347	1197 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	RASA1	P20936	1047 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	TRAPPC10	P48553	1259 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	ZNF75D	P51815	510 aa		12.3	□□□□□ -0.44
SPIDR-222	ENST00000524006	GRIK5	Q16478	980 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms