RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PARK7Q99497 189 aaKnown RBP15.16■□□□□ 0.02
VEGFA-224ENST00000523873 ASCC2Q9H1I8 757 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-224ENST00000523873 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-224ENST00000523873 VCPKMTQ9H867 229 aa15.16■□□□□ 0.02
VEGFA-224ENST00000523873 ZCCHC17Q9NP64 241 aaKnown RBP15.16■□□□□ 0.02
VEGFA-224ENST00000523873 NYAP2Q9P242 653 aa15.16■□□□□ 0.02
VEGFA-224ENST00000523873 A0A0G2JMZ2 1700 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 E7EWF7 191 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 TLR2O60603 784 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 PEX10O60683 326 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 TTLL1O95922 423 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 PCP11498 1178 aaKnown RBP15.15■□□□□ 0.02
VEGFA-224ENST00000523873 OSBPP22059 807 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-224ENST00000523873 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 SLC45A1Q9Y2W3 748 aa15.15■□□□□ 0.02
VEGFA-224ENST00000523873 HOXA7P31268 230 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-224ENST00000523873 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-224ENST00000523873 CAP1Q01518 475 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-224ENST00000523873 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 RASGRP2Q7LDG7 609 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-224ENST00000523873 ESR2Q92731 530 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
VEGFA-224ENST00000523873 GOPCQ9HD26 462 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
VEGFA-224ENST00000523873 MYH6P13533 1939 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 SMCHD1A6NHR9 2005 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L15C9J2P7 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L13C9JLJ4 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L11C9JVI0 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L18D6R9N7 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L22D6RA61 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L17D6RBQ6 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L19D6RCP7 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L20D6RJB6 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 F5H6K3 240 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 FKTNO75072 461 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 NDUFB10O96000 172 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 KLRC3Q07444 240 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 USP17L24Q0WX57 530 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.016e-13■■■■■ 112.3
VEGFA-224ENST00000523873 FAM83BQ5T0W9 1011 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
VEGFA-224ENST00000523873 C17orf99Q6UX52 265 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 CATSPERGQ6ZRH7 1159 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 CD99L2Q8TCZ2 262 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 MKL1Q969V6 931 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 KRT23Q9C075 422 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 TANGO6Q9C0B7 1094 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 ZSWIM5Q9P217 1185 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
VEGFA-224ENST00000523873 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
VEGFA-224ENST00000523873 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 POTEEQ6S8J3 1075 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 PLXNB2O15031 1838 aa15.12■□□□□ 0.01
VEGFA-224ENST00000523873 WDR46O15213 610 aaKnown RBP15.11■□□□□ 0.01
VEGFA-224ENST00000523873 BCRP11274 1271 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 CTGFP29279 349 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 NOVP48745 357 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 HERVK_113P62684 666 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 SP3Q02447 781 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 COL13A1Q5TAT6 717 aaPredicted RBP15.11■□□□□ 0.01
VEGFA-224ENST00000523873 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 RALYLQ86SE5 291 aaKnown RBP15.11■□□□□ 0.01
VEGFA-224ENST00000523873 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 NCOA7Q8NI08 942 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 LPAR1Q92633 364 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
VEGFA-224ENST00000523873 ARHGAP39Q9C0H5 1083 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 FBXO28Q9NVF7 368 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 TNKSO95271 1327 aa15.11■□□□□ 0.01
VEGFA-224ENST00000523873 SPDYE16A6NNV3 312 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-224ENST00000523873 FLOT1O75955 427 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 REC8O95072 547 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 TOP1P11387 765 aaKnown RBP15.1■□□□□ 0.01
VEGFA-224ENST00000523873 ANTXR2P58335 489 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 TRDNQ13061 729 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 NOM1Q5C9Z4 860 aaKnown RBP15.1■□□□□ 0.01
VEGFA-224ENST00000523873 MB21D2Q8IYB1 491 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-224ENST00000523873 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 PAGR1Q9BTK6 254 aa15.1■□□□□ 0.01
VEGFA-224ENST00000523873 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
VEGFA-224ENST00000523873 CNMDO75829 334 aa15.09■□□□□ 0.01
VEGFA-224ENST00000523873 MCCP23508 829 aa15.09■□□□□ 0.01
VEGFA-224ENST00000523873 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
VEGFA-224ENST00000523873 IQCA1Q86XH1 822 aa15.09■□□□□ 0.01
VEGFA-224ENST00000523873 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
VEGFA-224ENST00000523873 ATG4CQ96DT6 458 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms