RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NMT2O60551 498 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 OSBPP22059 807 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
DENND3-220ENST00000523066 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
DENND3-220ENST00000523066 TFAP4Q01664 338 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 PTH1RQ03431 593 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 PDE4BQ07343 736 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
DENND3-220ENST00000523066 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
DENND3-220ENST00000523066 CHMP4CQ96CF2 233 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 ABHD8Q96I13 439 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
DENND3-220ENST00000523066 KANSL2Q9H9L4 492 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 ARHGEF10LQ9HCE6 1279 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 TMX2Q9Y320 296 aa12.48□□□□□ -0.41
DENND3-220ENST00000523066 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 RAD21O60216 631 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
DENND3-220ENST00000523066 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 PSMC4P43686 418 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 USP14P54578 494 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
DENND3-220ENST00000523066 HERVK_113P62684 666 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 PABPC4Q13310 644 aaKnown RBP eCLIP12.47□□□□□ -0.41
DENND3-220ENST00000523066 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 NEDD1Q8NHV4 660 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 EFCC1Q9HA90 598 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 TOMM22Q9NS69 142 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
DENND3-220ENST00000523066 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 NEDD4P46934 1319 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 TSPY2A6NKD2 308 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 SGSM2O43147 1006 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
DENND3-220ENST00000523066 FGRP09769 529 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 Q3C1V9 767 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 LRRC47Q8N1G4 583 aaKnown RBP12.46□□□□□ -0.41
DENND3-220ENST00000523066 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
DENND3-220ENST00000523066 PAGR1Q9BTK6 254 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 DSCC1Q9BVC3 393 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 IL17RBQ9NRM6 502 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
DENND3-220ENST00000523066 PLIN4Q96Q06 1357 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 RAD50Q92878 1312 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 ZNF213O14771 459 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 ORC4O43929 436 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 CNMDO75829 334 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
DENND3-220ENST00000523066 BMP2KLQ5H9B9 411 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 FBXO46Q6PJ61 603 aaPredicted RBP12.45□□□□□ -0.42
DENND3-220ENST00000523066 RASGRP2Q7LDG7 609 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 TANGO6Q9C0B7 1094 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 ZNF287Q9HBT7 754 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 FBXO28Q9NVF7 368 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 NYAP2Q9P242 653 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 GABRQQ9UN88 632 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 PTCH2Q9Y6C5 1203 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
DENND3-220ENST00000523066 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
DENND3-220ENST00000523066 NDUFB10O96000 172 aa12.44□□□□□ -0.42
DENND3-220ENST00000523066 GCLCP48506 637 aaPredicted RBP12.44□□□□□ -0.42
DENND3-220ENST00000523066 KIF22Q14807 665 aa12.44□□□□□ -0.42
DENND3-220ENST00000523066 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
DENND3-220ENST00000523066 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
DENND3-220ENST00000523066 BTBD7Q9P203 1132 aa12.44□□□□□ -0.42
DENND3-220ENST00000523066 CCDC85CA6NKD9 419 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 B4E1Z4 1266 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 F5H6K3 240 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 TTLL1O95922 423 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 KLRC3Q07444 240 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
DENND3-220ENST00000523066 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 MFSD6Q6ZSS7 791 aa12.43□□□□□ -0.42
DENND3-220ENST00000523066 LPAR1Q92633 364 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms