RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZBTB42B2RXF5 422 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 TRPA1O75762 1119 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 ALDH1B1P30837 517 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 KIF23Q02241 960 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-210ENST00000522843 CLEC4GQ6UXB4 293 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 TTC5Q8N0Z6 440 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-210ENST00000522843 MAFBQ9Y5Q3 323 aaPredicted RBP8.99□□□□□ -0.97
SDCBP-210ENST00000522843 USP16Q9Y5T5 823 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 BRCA2P51587 3418 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
SDCBP-210ENST00000522843 HUNKP57058 714 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 CXCL9Q07325 125 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
SDCBP-210ENST00000522843 CTU1Q7Z7A3 348 aaKnown RBP8.98□□□□□ -0.97
SDCBP-210ENST00000522843 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 PCMTD2Q9NV79 361 aa8.98□□□□□ -0.97
SDCBP-210ENST00000522843 NIP7Q9Y221 180 aaKnown RBP eCLIP8.98□□□□□ -0.97
SDCBP-210ENST00000522843 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
SDCBP-210ENST00000522843 HOXA10P31260 410 aaPredicted RBP8.97□□□□□ -0.97
SDCBP-210ENST00000522843 FXR1P51114 621 aaKnown RBP eCLIP8.97□□□□□ -0.97
SDCBP-210ENST00000522843 SEC13P55735 322 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 PLAURQ03405 335 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 HLFQ16534 295 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 AOC3Q16853 763 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 RGMBQ6NW40 437 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 CDC37L1Q7L3B6 337 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 USP48Q86UV5 1035 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 ZFATQ9P243 1243 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 HTTP42858 3142 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 RIC1Q4ADV7 1423 aa8.97□□□□□ -0.97
SDCBP-210ENST00000522843 DEAF1O75398 565 aaPredicted RBP8.96□□□□□ -0.98
SDCBP-210ENST00000522843 RASA1P20936 1047 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 INPP5BP32019 993 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 MORC1Q86VD1 984 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 NIM1KQ8IY84 436 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 GCC1Q96CN9 775 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 FMNL2Q96PY5 1086 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 PANK3Q9H999 370 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 C11orf16Q9NQ32 467 aa8.96□□□□□ -0.98
SDCBP-210ENST00000522843 AKAP11Q9UKA4 1901 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 POLR2AP24928 1970 aaKnown RBP8.95□□□□□ -0.98
SDCBP-210ENST00000522843 DLL1O00548 723 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 TCERG1O14776 1098 aaKnown RBP8.95□□□□□ -0.98
SDCBP-210ENST00000522843 PPIP5K2O43314 1243 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 EGFRP00533 1210 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 TARSP26639 723 aaKnown RBP8.95□□□□□ -0.98
SDCBP-210ENST00000522843 GPLD1P80108 840 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 KRT25Q7Z3Z0 450 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 DZIP1LQ8IYY4 767 aaKnown RBP8.95□□□□□ -0.98
SDCBP-210ENST00000522843 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 AKTIPQ9H8T0 292 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 ZNRF3Q9ULT6 936 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
SDCBP-210ENST00000522843 CENPFP49454 3210 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 FSTP19883 344 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 IDH3AP50213 366 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 HINFPQ9BQA5 517 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 KIF7Q2M1P5 1343 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 CEMIPQ8WUJ3 1361 aa8.94□□□□□ -0.98
SDCBP-210ENST00000522843 YDJCA8MPS7 323 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 ADM5C9JUS6 153 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 PAX4O43316 350 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 RAD17O75943 681 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 SASH3O75995 380 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 RARAP10276 462 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 ARID4AP29374 1257 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 TEFQ10587 303 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 CRTC2Q53ET0 693 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 NPM2Q86SE8 214 aaKnown RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 TMEM130Q8N3G9 435 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 ZNF296Q8WUU4 475 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 RTFDC1Q9BY42 306 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 SMG9Q9H0W8 520 aaKnown RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 GBA2Q9HCG7 927 aaPredicted RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 CNOT7Q9UIV1 285 aaKnown RBP8.93□□□□□ -0.98
SDCBP-210ENST00000522843 CDHR2Q9BYE9 1310 aa8.93□□□□□ -0.98
SDCBP-210ENST00000522843 UBN2Q6ZU65 1347 aa8.92□□□□□ -0.98
SDCBP-210ENST00000522843 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
SDCBP-210ENST00000522843 SSTR4P31391 388 aa8.92□□□□□ -0.98
SDCBP-210ENST00000522843 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
SDCBP-210ENST00000522843 MRPL18Q9H0U6 180 aaKnown RBP8.92□□□□□ -0.98
SDCBP-210ENST00000522843 KLK14Q9P0G3 267 aa8.92□□□□□ -0.98
SDCBP-210ENST00000522843 DUOX1Q9NRD9 1551 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 LGR5O75473 907 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 ALX3O95076 343 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 IGFBP4P22692 258 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 ARSDP51689 593 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 PKN2Q16513 984 aaKnown RBP8.91□□□□□ -0.98
SDCBP-210ENST00000522843 SUSD4Q5VX71 490 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 HFE2Q6ZVN8 426 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 RASAL3Q86YV0 1011 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms