RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PSME4Q14997 1843 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 DLG5Q8TDM6 1919 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 H7C1D1 291 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 PSMD14O00487 310 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 FAM13AO94988 1023 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 FGFR3P22607 806 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 ARSDP51689 593 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 PKN2Q16513 984 aaKnown RBP8.43□□□□□ -1.06
VPS13B-211ENST00000522802 SUPT20HQ8NEM7 779 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 CDCA5Q96FF9 252 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 MARK1Q9P0L2 795 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 HDAC9Q9UKV0 1011 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 IVNS1ABPQ9Y6Y0 642 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 RTL9Q8NET4 1388 aa8.43□□□□□ -1.06
VPS13B-211ENST00000522802 SOWAHDA6NJG2 315 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 ERVV-1B6SEH8 477 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 C2CD2LO14523 706 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
VPS13B-211ENST00000522802 MX2P20592 715 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 MPSTP25325 297 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 ZAP70P43403 619 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 DCTN1Q14203 1278 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 KIF4BQ2VIQ3 1234 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
VPS13B-211ENST00000522802 FBXO46Q6PJ61 603 aaPredicted RBP8.42□□□□□ -1.06
VPS13B-211ENST00000522802 MOB2Q70IA6 237 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 TMEM151AQ8N4L1 468 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 DCPSQ96C86 337 aaKnown RBP8.42□□□□□ -1.06
VPS13B-211ENST00000522802 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 MBIPQ9NS73 344 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
VPS13B-211ENST00000522802 KIAA0100Q14667 2235 aaKnown RBP8.41□□□□□ -1.06
VPS13B-211ENST00000522802 ZNF646O15015 1829 aaPredicted RBP8.41□□□□□ -1.06
VPS13B-211ENST00000522802 LAMB1P07942 1786 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 GDF11O95390 407 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 MYL6BP14649 208 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 CD33P20138 364 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 EIF1AXP47813 144 aaKnown RBP8.41□□□□□ -1.06
VPS13B-211ENST00000522802 KIF6Q6ZMV9 814 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 ZNF34Q8IZ26 560 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 DBNDD1Q9H9R9 158 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 KCNQ5Q9NR82 932 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 LAMA3Q16787 3333 aa8.41□□□□□ -1.06
VPS13B-211ENST00000522802 H3BRB1 525 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 SRSF11Q05519 484 aaKnown RBP8.4□□□□□ -1.06
VPS13B-211ENST00000522802 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 CC2D1BQ5T0F9 858 aaKnown RBP8.4□□□□□ -1.06
VPS13B-211ENST00000522802 ALKBH2Q6NS38 261 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 DPF2Q92785 391 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 CNTNAP3BQ96NU0 1288 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 CNTNAP3Q9BZ76 1288 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-211ENST00000522802 R3HDMLQ9H3Y0 253 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.06
VPS13B-211ENST00000522802 MIS18AQ9NYP9 233 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
VPS13B-211ENST00000522802 SCAF8Q9UPN6 1271 aaKnown RBP8.4□□□□□ -1.06
VPS13B-211ENST00000522802 ZNF609O15014 1411 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 EPB42P16452 691 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 ARHGAP4P98171 946 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 ANGEL2Q5VTE6 544 aaKnown RBP8.39□□□□□ -1.07
VPS13B-211ENST00000522802 GLYCTKQ8IVS8 523 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 RRP7AQ9Y3A4 280 aaKnown RBP8.39□□□□□ -1.07
VPS13B-211ENST00000522802 KCNMB2Q9Y691 235 aa8.39□□□□□ -1.07
VPS13B-211ENST00000522802 ECE2O60344 883 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 HCLS1P14317 486 aaPredicted RBP8.38□□□□□ -1.07
VPS13B-211ENST00000522802 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
VPS13B-211ENST00000522802 GRAPQ13588 217 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 GRAPLQ8TC17 118 aaPredicted RBP8.38□□□□□ -1.07
VPS13B-211ENST00000522802 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 ZNF428Q96B54 188 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 SLC30A3Q99726 388 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
VPS13B-211ENST00000522802 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
VPS13B-211ENST00000522802 UBE2Q2LH0YL09 131 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 DLL1O00548 723 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 FZD6O60353 706 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 FKTNO75072 461 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 BBOX1O75936 387 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 BMP4P12644 408 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 MAP2K3P46734 347 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
VPS13B-211ENST00000522802 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 LRP10Q7Z4F1 713 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 PPP1R42Q7Z4L9 355 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
VPS13B-211ENST00000522802 GPR152Q8TDT2 470 aa8.37□□□□□ -1.07
VPS13B-211ENST00000522802 RTF1Q92541 710 aaKnown RBP8.37□□□□□ -1.07
VPS13B-211ENST00000522802 UTP14AQ9BVJ6 771 aaKnown RBP8.37□□□□□ -1.07
VPS13B-211ENST00000522802 EFCC1Q9HA90 598 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms