RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 CALM1P0DP23 149 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 CALM2P0DP24 149 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 CALM3P0DP25 149 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 ECE1P42892 770 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 LRRC47Q8N1G4 583 aaKnown RBP30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 GMCL1P1Q8NEA9 526 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 KIAA1683Q9H0B3 1180 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 AFG3L2Q9Y4W6 797 aa30.02■■■□□ 2.4
NKX2-1-204ENST00000522719 USP17L10C9JJH3 530 aa30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 HUNKP57058 714 aa30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 NOL8Q76FK4 1167 aaKnown RBP30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 MAP3K14Q99558 947 aa30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 FEZ1Q99689 392 aa30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 LARP6Q9BRS8 491 aaKnown RBP30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 GOPCQ9HD26 462 aa30.01■■■□□ 2.39
NKX2-1-204ENST00000522719 ZBTB43O43298 467 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 PDIA3P30101 505 aaKnown RBP30■■■□□ 2.39
NKX2-1-204ENST00000522719 USP14P54578 494 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 TROAPQ12815 778 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 SPP2Q13103 211 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 PPIL2Q13356 520 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 SAPCD2Q86UD0 394 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 SH2B1Q9NRF2 756 aaPredicted RBP30■■■□□ 2.39
NKX2-1-204ENST00000522719 TLL2Q9Y6L7 1015 aa30■■■□□ 2.39
NKX2-1-204ENST00000522719 C19orf81C9J6K1 198 aa29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 ANP32AP39687 249 aaKnown RBP29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 BACE1P56817 501 aa29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 HSCBQ8IWL3 235 aa29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 OPTNQ96CV9 577 aa29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 NAP1L2Q9ULW6 460 aaPredicted RBP29.99■■■□□ 2.39
NKX2-1-204ENST00000522719 GOLGA8BA8MQT2 603 aa29.98■■■□□ 2.39
NKX2-1-204ENST00000522719 PPP2R5BQ15173 497 aa29.98■■■□□ 2.39
NKX2-1-204ENST00000522719 OTUD5Q96G74 571 aa29.98■■■□□ 2.39
NKX2-1-204ENST00000522719 VCPKMTQ9H867 229 aa29.98■■■□□ 2.39
NKX2-1-204ENST00000522719 NID2Q14112 1375 aa29.98■■■□□ 2.39
NKX2-1-204ENST00000522719 F5H6K3 240 aa29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 CXCL11O14625 94 aa29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 KLRC3Q07444 240 aa29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 ME3Q16798 604 aa29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 MICU3Q86XE3 530 aa29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.97■■■□□ 2.39
NKX2-1-204ENST00000522719 TRIM75PA6NK02 468 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 PFKFB2O60825 505 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 SNHG28P0DPA3 235 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 MTMR2Q13614 643 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 NUP133Q8WUM0 1156 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 CNKSR2Q8WXI2 1034 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 LPAR1Q92633 364 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 HHIPL1Q96JK4 782 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 MYL10Q9BUA6 226 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 SLKQ9H2G2 1235 aaPredicted RBP29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 HPS5Q9UPZ3 1129 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 KCNH4Q9UQ05 1017 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 K7ELQ4 463 aaPredicted RBP29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 IRF6O14896 467 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 PDHBP11177 359 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 METAP2P50579 478 aaKnown RBP eCLIP29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 SLFN13Q68D06 897 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 USP17L2Q6R6M4 530 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 FANCBQ8NB91 859 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 DCAF4Q8WV16 495 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 CHMP4CQ96CF2 233 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 GMCL1Q96IK5 515 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 TMX3Q96JJ7 454 aa29.96■■■□□ 2.39
NKX2-1-204ENST00000522719 GOLGA8AA7E2F4 631 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 KIF5BP33176 963 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 BECN1Q14457 450 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 GRM4Q14833 912 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 SH3D19Q5HYK7 790 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 CTCFLQ8NI51 663 aaPredicted RBP29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 WNK4Q96J92 1243 aa29.95■■■□□ 2.38
NKX2-1-204ENST00000522719 CCDC196A0A1B0GTZ2 297 aa29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 NDUFB10O96000 172 aa29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 ZBTB48P10074 688 aaPredicted RBP29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 APLP1P51693 650 aa29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 C12orf42Q96LP6 360 aa29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 RBM28Q9NW13 759 aaKnown RBP29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 ABT1Q9ULW3 272 aaKnown RBP29.94■■■□□ 2.38
NKX2-1-204ENST00000522719 LARGE1O95461 756 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 PARP1P09874 1014 aaKnown RBP29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 SLC1A4P43007 532 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 STK3Q13188 491 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 ZYXQ15942 572 aaKnown RBP29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 RTN1Q16799 776 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 RGMBQ6NW40 437 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 MTMR7Q9Y216 660 aa29.93■■■□□ 2.38
NKX2-1-204ENST00000522719 LOC285556D6RIA3 1793 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 RAD21O60216 631 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 DHX16O60231 1041 aaKnown RBP29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 RXRAP19793 462 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 ASPRV1Q53RT3 343 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 GPATCH4Q5T3I0 446 aaKnown RBP29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 SPRYD7Q5W111 196 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 RAB11FIP4Q86YS3 637 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 GTF3C6Q969F1 213 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 CREBZFQ9NS37 354 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 EMILIN3Q9NT22 766 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 TMOD4Q9NZQ9 345 aa29.92■■■□□ 2.38
NKX2-1-204ENST00000522719 A0A0G2JLL6 359 aaPredicted RBP29.91■■■□□ 2.38
NKX2-1-204ENST00000522719 GJA5P36382 358 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms