RNA–Protein interactions for RNA: ENST00000522702.5

FAM49B-222, Transcript of family with sequence similarity 49 member B, human

TSL 4

Gene FAM49B, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-222	ENST00000522702	LMNB1	P20700	586 aa		5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	BUD31	P41223	144 aa	Predicted RBP	5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	PRAMEF13	Q5VWM6	474 aa		5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	PIWIL2	Q8TC59	973 aa	Known RBP	5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	NOC4L	Q9BVI4	516 aa	Known RBP	5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	KRTAP4-5	Q9BYR2	181 aa		5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	TGIF2	Q9GZN2	237 aa		5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	IRF2BPL	Q9H1B7	796 aa		5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	TTF2	Q9UNY4	1162 aa	Known RBP	5.87	□□□□□ -1.47
FAM49B-222	ENST00000522702	HPX	P02790	462 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	ESR1	P03372	595 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	CELA3A	P09093	270 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	GRK4	P32298	578 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	ETV3	P41162	512 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	LINC00310	P59036	64 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	RACK1	P63244	317 aa	Known RBP	5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	SV2B	Q7L1I2	683 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	HS2ST1	Q7LGA3	356 aa		5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	TRIT1	Q9H3H1	467 aa	Known RBP	5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	DDX41	Q9UJV9	622 aa	Known RBP	5.86	□□□□□ -1.47
FAM49B-222	ENST00000522702	SRF	P11831	508 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	ZNF394	Q53GI3	561 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	TMEM132E	Q6IEE7	984 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	SYTL4	Q96C24	671 aa	Predicted RBP	5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	TINF2	Q9BSI4	451 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	CHMP4A	Q9BY43	222 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	GGT7	Q9UJ14	662 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	PCDHGB7	Q9Y5F8	929 aa		5.85	□□□□□ -1.47
FAM49B-222	ENST00000522702	NCL	P19338	710 aa	Known RBP	5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	TPP2	P29144	1249 aa	Predicted RBP	5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	TTBK2	Q6IQ55	1244 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	USP48	Q86UV5	1035 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	OXR1	Q8N573	874 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	RELT	Q969Z4	430 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	RSRP1	Q9BUV0	290 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	RNF32	Q9H0A6	362 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	COPRS	Q9NQ92	184 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	GPATCH2	Q9NW75	528 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	TACC3	Q9Y6A5	838 aa		5.84	□□□□□ -1.47
FAM49B-222	ENST00000522702	HOXA5	P20719	270 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	TRHR	P34981	398 aa	Predicted RBP	5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	CDK8	P49336	464 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	CCDC85B	Q15834	202 aa	Predicted RBP	5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	SLC6A19	Q695T7	634 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	LILRA2	Q8N149	483 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	PDZD8	Q8NEN9	1154 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	DHX38	Q92620	1227 aa	Known RBP	5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	SLC6A17	Q9H1V8	727 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	ACBD3	Q9H3P7	528 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	ZCCHC4	Q9H5U6	513 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	KBTBD4	Q9NVX7	518 aa		5.83	□□□□□ -1.48
FAM49B-222	ENST00000522702	WASH4P	A8MWX3	477 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	GFRA2	O00451	464 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	PGR	P06401	933 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	BMP7	P18075	431 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	IRF2BP1	Q8IU81	584 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	MRPL41	Q8IXM3	137 aa	Known RBP	5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	ZNF654	Q8IZM8	581 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	GAL3ST3	Q96A11	431 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	TANGO6	Q9C0B7	1094 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	C19orf44	Q9H6X5	657 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	CCSER2	Q9H7U1	834 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	PARD6A	Q9NPB6	346 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	DUSP13	Q9UII6	198 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	KCNH3	Q9ULD8	1083 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	CEP131	Q9UPN4	1083 aa		5.82	□□□□□ -1.48
FAM49B-222	ENST00000522702	ANKRD62	A6NC57	917 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	TNNI2	P48788	182 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	DLG4	P78352	724 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	EGR3	Q06889	387 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	PDE4B	Q07343	736 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	ZNF605	Q86T29	641 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	SPPL2C	Q8IUH8	684 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	TMEM87B	Q96K49	555 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	RHOV	Q96L33	236 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	C20orf173	Q96LM9	149 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	DNAJC2	Q99543	621 aa	Known RBP	5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	DPH2	Q9BQC3	489 aa	Predicted RBP	5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	CWC22	Q9HCG8	908 aa	Known RBP	5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	KCNQ5	Q9NR82	932 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	TJP2	Q9UDY2	1190 aa		5.81	□□□□□ -1.48
FAM49B-222	ENST00000522702	FITM1	A5D6W6	292 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	PEX10	O60683	326 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	RLBP1	P12271	317 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	LIG3	P49916	1009 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	RPS26	P62854	115 aa	Known RBP	5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	GAB4	Q2WGN9	574 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	ZNF385B	Q569K4	471 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	DIEXF	Q68CQ4	756 aa	Known RBP	5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	DPH6	Q7L8W6	267 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	ANKRD13A	Q8IZ07	590 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	SLC43A3	Q8NBI5	491 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	PHC3	Q8NDX5	983 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	TMEM74	Q96NL1	305 aa		5.8	□□□□□ -1.48
FAM49B-222	ENST00000522702	GPR62	Q9BZJ7	368 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms