RNA–Protein interactions for RNA: ENST00000521806.5

GPAT4-210, Transcript of glycerol-3-phosphate acyltransferase 4, human

TSL 5

Gene GPAT4, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPAT4-210	ENST00000521806	PEX10	O60683	326 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	SYN1	P17600	705 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	CYP7A1	P22680	504 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	BMP8B	P34820	402 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	ADD2	P35612	726 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	RGS2	P41220	211 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	USP5	P45974	858 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	SLC4A3	P48751	1232 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	ERVK-9	P63128	1117 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	ERVK-24	P63145	666 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	JAG1	P78504	1218 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	UBE3C	Q15386	1083 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	USP17L2	Q6R6M4	530 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	METTL16	Q86W50	562 aa	Known RBP	12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	HSCB	Q8IWL3	235 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	SLC17A8	Q8NDX2	589 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	SEC62	Q99442	399 aa	Known RBP	12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	FEZ1	Q99689	392 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	GDF15	Q99988	308 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	TM6SF1	Q9BZW5	370 aa		12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.9	□□□□□ -0.34	2e-6	■■■□□ 18.3
GPAT4-210	ENST00000521806	PIH1D3	Q9NQM4	214 aa	Known RBP	12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	DDX60L	Q5H9U9	1706 aa	Known RBP	12.9	□□□□□ -0.34
GPAT4-210	ENST00000521806	CHGB	P05060	677 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	DYNLL1	P63167	89 aa	Known RBP	12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	ZYX	Q15942	572 aa	Known RBP	12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	MAP3K21	Q5TCX8	1036 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	GPR142	Q7Z601	462 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	PLEKHH3	Q7Z736	793 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	CERS3	Q8IU89	383 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	RASEF	Q8IZ41	740 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	APPBP2	Q92624	585 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	DSCC1	Q9BVC3	393 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	RBPJL	Q9UBG7	517 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	RBM8A	Q9Y5S9	174 aa	Known RBP	12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806		U3KPZ7	1027 aa	Predicted RBP	12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	PLXNB2	O15031	1838 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	ALPK3	Q96L96	1907 aa		12.89	□□□□□ -0.35
GPAT4-210	ENST00000521806	FOCAD	Q5VW36	1801 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	RANBP2	P49792	3224 aa	Known RBP	12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	TCRBV5S4A2T	A0A5A2	114 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	IDH1	O75874	414 aa	Known RBP	12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	CD2BP2	O95400	341 aa	Known RBP	12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	GH2	P01242	217 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	MCM2	P49736	904 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	MNX1	P50219	401 aa	Predicted RBP	12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	CACNB2	Q08289	660 aa	Predicted RBP	12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	RAB3GAP1	Q15042	981 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806		Q3C1V9	767 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	CREB3L3	Q68CJ9	461 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	MIGA1	Q8NAN2	632 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	OSBP2	Q969R2	916 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	APBA2	Q99767	749 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	PORCN	Q9H237	461 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	EMILIN3	Q9NT22	766 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	DOCK3	Q8IZD9	2030 aa		12.88	□□□□□ -0.35
GPAT4-210	ENST00000521806	CDK5RAP2	Q96SN8	1893 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L15	C9J2P7	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L13	C9JLJ4	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L11	C9JVI0	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L18	D6R9N7	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L22	D6RA61	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L17	D6RBQ6	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L19	D6RCP7	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L20	D6RJB6	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806		K7ELQ4	463 aa	Predicted RBP	12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	SLC27A2	O14975	620 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	ST18	O60284	1047 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	CCND3	P30281	292 aa	Predicted RBP	12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	MAGEA10	P43363	369 aa	Predicted RBP	12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP14	P54578	494 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	CCNA1	P78396	465 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP17L24	Q0WX57	530 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	CCL14	Q16627	93 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	WDR78	Q5VTH9	848 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	TMED8	Q6PL24	325 aa	Predicted RBP	12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	TDH	Q8IZJ6	230 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	SERPINB13	Q9UIV8	391 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806	PFAS	O15067	1338 aa		12.87	□□□□□ -0.35
GPAT4-210	ENST00000521806		M0R2C6	588 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	DLL1	O00548	723 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	HSPD1	P10809	573 aa	Known RBP	12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	PDE6A	P16499	860 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	NEK4	P51957	841 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	MAP3K12	Q12852	859 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	SLFNL1	Q499Z3	407 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	CERKL	Q49MI3	558 aa	Predicted RBP	12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	MORN1	Q5T089	497 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	SLC9C2	Q5TAH2	1124 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	RNF20	Q5VTR2	975 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	GPR153	Q6NV75	609 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	TATDN1	Q6P1N9	297 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	CCDC129	Q6ZRS4	1044 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	TTC6	Q86TZ1	520 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	MAGEB6	Q8N7X4	407 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	USP6NL	Q92738	828 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	TTC14	Q96N46	770 aa		12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	UBE2O	Q9C0C9	1292 aa	Known RBP	12.86	□□□□□ -0.35
GPAT4-210	ENST00000521806	EHD4	Q9H223	541 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms