RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 BSDC1Q9NW68 430 aaPredicted RBP18.03■□□□□ 0.48
USP42-207ENST00000521713 IMPACTQ9P2X3 320 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 CNGA4Q8IV77 575 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 MED23Q9ULK4 1368 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 POLR2DO15514 142 aaKnown RBP18.02■□□□□ 0.48
USP42-207ENST00000521713 KIF22Q14807 665 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 SLC27A3Q5K4L6 730 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 SUSD4Q5VX71 490 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 H7C1W4 665 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 IGSF3O75054 1194 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 ATP2C2O75185 946 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 PTH1RQ03431 593 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 TAF12Q16514 161 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 HERC4Q5GLZ8 1057 aaPredicted RBP18.02■□□□□ 0.48
USP42-207ENST00000521713 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 PPP1R9BQ96SB3 815 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.48
USP42-207ENST00000521713 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.48
USP42-207ENST00000521713 HARSP12081 509 aaKnown RBP18.02■□□□□ 0.47
USP42-207ENST00000521713 ARHGAP25P42331 645 aa18.02■□□□□ 0.47
USP42-207ENST00000521713 CPLX4Q7Z7G2 160 aa18.02■□□□□ 0.47
USP42-207ENST00000521713 MLKLQ8NB16 471 aa18.02■□□□□ 0.47
USP42-207ENST00000521713 GJD4Q96KN9 370 aaPredicted RBP18.02■□□□□ 0.47
USP42-207ENST00000521713 PAGR1Q9BTK6 254 aa18.02■□□□□ 0.47
USP42-207ENST00000521713 ALAS1P13196 640 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
USP42-207ENST00000521713 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
USP42-207ENST00000521713 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.473e-6■■■□□ 15.4
USP42-207ENST00000521713 DAAM2Q86T65 1068 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 COA1Q9GZY4 146 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 DBNDD1Q9H9R9 158 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 GAS7O60861 476 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 VWA3BQ502W6 1294 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 BLIDQ8IZY5 108 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 TTLL11Q8NHH1 800 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 SAMD15Q9P1V8 674 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 DDX39AO00148 427 aaKnown RBP18.01■□□□□ 0.47
USP42-207ENST00000521713 SLC8A3P57103 927 aa18.01■□□□□ 0.47
USP42-207ENST00000521713 LACTBP83111 547 aaPredicted RBP18.01■□□□□ 0.47
USP42-207ENST00000521713 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
USP42-207ENST00000521713 JAK2O60674 1132 aa18■□□□□ 0.47
USP42-207ENST00000521713 PFKFB2O60825 505 aa18■□□□□ 0.47
USP42-207ENST00000521713 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
USP42-207ENST00000521713 OTUD6AQ7L8S5 288 aa18■□□□□ 0.47
USP42-207ENST00000521713 CABP7Q86V35 215 aa18■□□□□ 0.47
USP42-207ENST00000521713 LEO1Q8WVC0 666 aaPredicted RBP18■□□□□ 0.47
USP42-207ENST00000521713 ZMYM6O95789 1325 aa18■□□□□ 0.47
USP42-207ENST00000521713 M0QZ92 97 aa18■□□□□ 0.47
USP42-207ENST00000521713 DPH6Q7L8W6 267 aa18■□□□□ 0.47
USP42-207ENST00000521713 NOC4LQ9BVI4 516 aaKnown RBP18■□□□□ 0.47
USP42-207ENST00000521713 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
USP42-207ENST00000521713 IFNKQ9P0W0 207 aa18■□□□□ 0.47
USP42-207ENST00000521713 LMTK2Q8IWU2 1503 aa18■□□□□ 0.47
USP42-207ENST00000521713 LRRC47Q8N1G4 583 aaKnown RBP18■□□□□ 0.47
USP42-207ENST00000521713 CCDC97Q96F63 343 aaPredicted RBP18■□□□□ 0.47
USP42-207ENST00000521713 TSGA10Q9BZW7 698 aa18■□□□□ 0.47
USP42-207ENST00000521713 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
USP42-207ENST00000521713 A0A1W2PRG0 241 aa18■□□□□ 0.47
USP42-207ENST00000521713 INPP5BP32019 993 aa18■□□□□ 0.47
USP42-207ENST00000521713 NT5C2P49902 561 aa18■□□□□ 0.47
USP42-207ENST00000521713 TBC1D8BQ0IIM8 1120 aa18■□□□□ 0.47
USP42-207ENST00000521713 CFAP58Q5T655 872 aa18■□□□□ 0.47
USP42-207ENST00000521713 KIFAP3Q92845 792 aa18■□□□□ 0.47
USP42-207ENST00000521713 TRIM6Q9C030 488 aaPredicted RBP18■□□□□ 0.47
USP42-207ENST00000521713 GINS2Q9Y248 185 aa18■□□□□ 0.47
USP42-207ENST00000521713 KDM3AQ9Y4C1 1321 aa18■□□□□ 0.47
USP42-207ENST00000521713 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
USP42-207ENST00000521713 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 GLI2P10070 1586 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 FLOT1O75955 427 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 SCG2P13521 617 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 GRIPAP1Q4V328 841 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 ARHGEF16Q5VV41 709 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 USP14P54578 494 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 TRPC3Q13507 836 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 ZNF569Q5MCW4 686 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 UTP14CQ5TAP6 766 aaKnown RBP17.99■□□□□ 0.47
USP42-207ENST00000521713 TMED8Q6PL24 325 aaPredicted RBP17.99■□□□□ 0.47
USP42-207ENST00000521713 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
USP42-207ENST00000521713 CRB1P82279 1406 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 ME3Q16798 604 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 MYSM1Q5VVJ2 828 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 RGS22Q8NE09 1264 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 GLG1Q92896 1179 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 SERPINB13Q9UIV8 391 aa17.99■□□□□ 0.47
USP42-207ENST00000521713 ADD2P35612 726 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 TNNC1P63316 161 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 BAG1Q99933 345 aaPredicted RBP17.98■□□□□ 0.47
USP42-207ENST00000521713 RAPGEF1Q13905 1077 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 TRIM14Q14142 442 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 CIAPIN1Q6FI81 312 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms