RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 LEXMQ3ZCV2 418 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 SH3D19Q5HYK7 790 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 FAM47AQ5JRC9 791 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 TOX2Q96NM4 488 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 GPR179Q6PRD1 2367 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 SETXQ7Z333 2677 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 PROB1E7EW31 1015 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 CHAF1AQ13111 956 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 GRB10Q13322 594 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 RRP1BQ14684 758 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 PRAMEF19Q5SWL8 479 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 SPRED2Q7Z698 418 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 PCDHA11Q9Y5I1 949 aa9.23□□□□□ -0.93
CTNNA1-227ENST00000521387 USP24Q9UPU5 2620 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 A0A1W2PQ45 241 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 A0A1W2PQY0 241 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 DDTLA6NHG4 134 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 SEPT4O43236 478 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 PLIN1O60240 522 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 CNMDO75829 334 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 HOXB7P09629 217 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 PTPREP23469 700 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 PABPC4Q13310 644 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 CWF19L2Q2TBE0 894 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 UBE3BQ7Z3V4 1068 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 BMP8AQ7Z5Y6 402 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 FBXO33Q7Z6M2 555 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 LRRFIP2Q9Y608 721 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-227ENST00000521387 DOCK1Q14185 1865 aa9.21□□□□□ -0.93
CTNNA1-227ENST00000521387 SPTBN2O15020 2390 aa9.21□□□□□ -0.93
CTNNA1-227ENST00000521387 EP300Q09472 2414 aaPredicted RBP9.21□□□□□ -0.93
CTNNA1-227ENST00000521387 PRR23AA6NEV1 266 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 CA3P07451 260 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 PPP2R1AP30153 589 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 ZP2Q05996 745 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 OTOP2Q7RTS6 562 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 IL23AQ9NPF7 189 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 MAP3K2Q9Y2U5 619 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 ZNF292O60281 2723 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 SMCHD1A6NHR9 2005 aa9.21□□□□□ -0.94
CTNNA1-227ENST00000521387 ANKRD18BA2A2Z9 1011 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 SLC15A5A6NIM6 579 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 NEURL1BA8MQ27 555 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 FGBP02675 491 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 KCNA5P22460 613 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 IRX3P78415 501 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 GRB14Q14449 540 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 EPHA10Q5JZY3 1008 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 CCDC174Q6PII3 467 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 TBC1D22AQ8WUA7 517 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 ARNTL2Q8WYA1 636 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 ATOH1Q92858 354 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 PRRX2Q99811 253 aa9.2□□□□□ -0.94
CTNNA1-227ENST00000521387 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 DCDC2CA8MYV0 355 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 PGK1P00558 417 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 IRS1P35568 1242 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 RGS3P49796 1198 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 CDK7P50613 346 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 TAP1Q03518 808 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 UBE4AQ14139 1066 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 DIXDC1Q155Q3 683 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 TMEM199Q8N511 208 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 RMDN1Q96DB5 314 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 PAGR1Q9BTK6 254 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 PPP1R12CQ9BZL4 782 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 USP40Q9NVE5 1235 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 MUTYHQ9UIF7 546 aa9.19□□□□□ -0.94
CTNNA1-227ENST00000521387 CYP2C18P33260 490 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 VCPP55072 806 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 RIPK4P57078 832 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 FOXO4P98177 505 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 UMODL1Q5DID0 1318 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 OLFML2BQ68BL8 750 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 KMT2EQ8IZD2 1858 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 CEP250Q9BV73 2442 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 DDX4Q9NQI0 724 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
CTNNA1-227ENST00000521387 FAM208BQ5VWN6 2430 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 PI4KAP2A4QPH2 592 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 H0Y858 1186 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 JAG1P78504 1218 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 GCKRQ14397 625 aa9.17□□□□□ -0.94
CTNNA1-227ENST00000521387 CCAR1Q8IX12 1150 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms