RNA–Protein interactions for RNA: ENST00000521250.5

PTK2-230, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-230	ENST00000521250	CREBZF	Q9NS37	354 aa		11.18	□□□□□ -0.62
PTK2-230	ENST00000521250	TRIM75P	A6NK02	468 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	IRF6	O14896	467 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	AK2	P54819	239 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	BACE1	P56817	501 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	EVC	P57679	992 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	SPRYD7	Q5W111	196 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	USP17L2	Q6R6M4	530 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	CATIP	Q7Z7H3	387 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	LRRC47	Q8N1G4	583 aa	Known RBP	11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	PNMA1	Q8ND90	353 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	CCDC102A	Q96A19	550 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	VCPKMT	Q9H867	229 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	GOPC	Q9HD26	462 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	KCNH4	Q9UQ05	1017 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	SLC12A7	Q9Y666	1083 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	GREB1L	Q9C091	1923 aa	Predicted RBP	11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	DOCK1	Q14185	1865 aa		11.17	□□□□□ -0.62
PTK2-230	ENST00000521250	KLF18	A0A0U1RQI7	1052 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250		F5H6K3	240 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	RAD21	O60216	631 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	DDAH1	O94760	285 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	CALM1	P0DP23	149 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	CALM2	P0DP24	149 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	CALM3	P0DP25	149 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	ZBTB48	P10074	688 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	GJA5	P36382	358 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	MCM2	P49736	904 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	KLRC3	Q07444	240 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	APOBR	Q0VD83	1088 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	SNAPC2	Q13487	334 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	MTMR2	Q13614	643 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	ZYX	Q15942	572 aa	Known RBP	11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	SH3D19	Q5HYK7	790 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	SLFN13	Q68D06	897 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	APOA5	Q6Q788	366 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	ZNF654	Q8IZM8	581 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	GMCL1P1	Q8NEA9	526 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	ZNF274	Q96GC6	653 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	TMOD4	Q9NZQ9	345 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	BRPF3	Q9ULD4	1205 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	LIMCH1	Q9UPQ0	1083 aa		11.16	□□□□□ -0.62
PTK2-230	ENST00000521250	ZBTB43	O43298	467 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	NDUFB10	O96000	172 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	SLC10A3	P09131	477 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	GTF2A2	P52657	109 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	RCAN1	P53805	252 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	DEFB115	Q30KQ5	88 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	RASAL3	Q86YV0	1011 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	NUP133	Q8WUM0	1156 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	DCAF4	Q8WV16	495 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	LPAR1	Q92633	364 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	C12orf42	Q96LP6	360 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	MAP3K14	Q99558	947 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	LARP6	Q9BRS8	491 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	EMILIN3	Q9NT22	766 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	MTMR7	Q9Y216	660 aa		11.15	□□□□□ -0.62
PTK2-230	ENST00000521250	ATAD5	Q96QE3	1844 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	OTOF	Q9HC10	1997 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250		A0A0G2JLL6	359 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	RASSF10	A6NK89	507 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	PDHB	P11177	359 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	CETP	P11597	493 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	PDIA3	P30101	505 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	SLC1A4	P43007	532 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	HMGCS2	P54868	508 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	C1QTNF8	P60827	252 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	TROAP	Q12815	778 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	MKRN3	Q13064	507 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	PPP2R5B	Q15173	497 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	NOL8	Q76FK4	1167 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	FASTKD5	Q7L8L6	764 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	CTCFL	Q8NI51	663 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	SNX21	Q969T3	373 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	GMCL1	Q96IK5	515 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	MYL10	Q9BUA6	226 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	SLK	Q9H2G2	1235 aa	Predicted RBP	11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	TPCN1	Q9ULQ1	816 aa		11.14	□□□□□ -0.63
PTK2-230	ENST00000521250	MANSC4	A6NHS7	340 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	GOLGA8A	A7E2F4	631 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	GOLGA8B	A8MQT2	603 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	FAM155A	B1AL88	458 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	WDR46	O15213	610 aa	Known RBP	11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	PARP1	P09874	1014 aa	Known RBP	11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	SNHG28	P0DPA3	235 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	BMP3	P12645	472 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	KIF5B	P33176	963 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	GNAQ	P50148	359 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	METAP2	P50579	478 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	ZNF543	Q08ER8	600 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	GRM4	Q14833	912 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	CCDC96	Q2M329	555 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	ASPRV1	Q53RT3	343 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	KIAA1755	Q5JYT7	1200 aa		11.13	□□□□□ -0.63
PTK2-230	ENST00000521250	GPATCH4	Q5T3I0	446 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms