RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 KRT2P35908 639 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 IQCB1Q15051 598 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 GALNT17Q6IS24 598 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 ZNF444Q8N0Y2 327 aaPredicted RBP11.43□□□□□ -0.58
SPARC-202ENST00000520687 TBC1D16Q8TBP0 767 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SPARC-202ENST00000520687 PHF20Q9BVI0 1012 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 KAT14Q9H8E8 782 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 MKNK2Q9HBH9 465 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 BTBD18B2RXH4 712 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 NEMFO60524 1076 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 PTPREP23469 700 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 SMARCA1P28370 1054 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 NLRP12P59046 1061 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 DDR1Q08345 913 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 LUZP1Q86V48 1076 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 FERMT2Q96AC1 680 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 MRFAP1L1Q96HT8 127 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 DNAJC25Q9H1X3 360 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 GJB4Q9NTQ9 266 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 GAKO14976 1311 aa11.42□□□□□ -0.58
SPARC-202ENST00000520687 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 TRIM75PA6NK02 468 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 PPEF1O14829 653 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 ZNF75DP51815 510 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 CT47A1Q5JQC4 288 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 RTFDC1Q9BY42 306 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 V9GY48 417 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 THSD7BQ9C0I4 1608 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 IKBKBO14920 756 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 WDHD1O75717 1129 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 TFAP4Q01664 338 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 RASSF7Q02833 373 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 PKN1Q16512 942 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 PFKFB3Q16875 520 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 SH3RF3Q8TEJ3 882 aaPredicted RBP11.41□□□□□ -0.58
SPARC-202ENST00000520687 EYA3Q99504 573 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 TUBE1Q9UJT0 475 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
SPARC-202ENST00000520687 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPARC-202ENST00000520687 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 CA12O43570 354 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 PRDM1O75626 825 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 TSPY3P0CV98 308 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 TSPY8P0CW00 308 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 SCG2P13521 617 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 KCNA4P22459 653 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
SPARC-202ENST00000520687 BTDP43251 543 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 TOB1P50616 345 aaPredicted RBP11.4□□□□□ -0.58
SPARC-202ENST00000520687 DGKZQ13574 1117 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 GRM4Q14833 912 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 MFSD14BQ5SR56 506 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 RCSD1Q6JBY9 416 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 C16orf86Q6ZW13 317 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 TEX11Q8IYF3 940 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 MRIQ9BWK5 157 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 ZC3H12CQ9C0D7 883 aaKnown RBP11.4□□□□□ -0.58
SPARC-202ENST00000520687 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 DACH1Q9UI36 760 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 FBXO2Q9UK22 296 aaPredicted RBP11.4□□□□□ -0.58
SPARC-202ENST00000520687 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
SPARC-202ENST00000520687 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 DLL1O00548 723 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 SRGNP10124 158 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
SPARC-202ENST00000520687 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 CCDC148Q8NFR7 591 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 NEDD1Q8NHV4 660 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 MASTLQ96GX5 879 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 LAMB1P07942 1786 aa11.39□□□□□ -0.59
SPARC-202ENST00000520687 CYP2D6P10635 497 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 ECE1P42892 770 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 NOVP48745 357 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 HABP4Q5JVS0 413 aaKnown RBP11.38□□□□□ -0.59
SPARC-202ENST00000520687 OLFM4Q6UX06 510 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 MPNDQ8N594 471 aa11.38□□□□□ -0.59
SPARC-202ENST00000520687 SRBD1Q8N5C6 995 aaKnown RBP11.38□□□□□ -0.59
SPARC-202ENST00000520687 CNNM3Q8NE01 707 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms