RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FAM173BQ6P4H8 233 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 LMBR1LQ6UX01 489 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 C17orf53Q8N3J3 647 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 C16orf45Q96MC5 204 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 NEUROD6Q96NK8 337 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 CD209Q9NNX6 404 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 NAP1L2Q9ULW6 460 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 PDE4DIPQ5VU43 2346 aa9.95□□□□□ -0.82
CTNNA1-223ENST00000520520 MKI67P46013 3256 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 MAST3O60307 1309 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 CPLX1O14810 134 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 PPP1R12BO60237 982 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 CASP7P55210 303 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 EVCP57679 992 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 EXOSC10Q01780 885 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 DMTNQ08495 405 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 IQCB1Q15051 598 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 PTPN14Q15678 1187 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 TAF7LQ5H9L4 462 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 TTC39AQ5SRH9 613 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 ADALQ6DHV7 355 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 ZNF710Q8N1W2 664 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 WNK4Q96J92 1243 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 ZNF594Q96JF6 807 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 C8orf76Q96K31 380 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 NOL10Q9BSC4 688 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 POLR3EQ9NVU0 708 aa9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 HOOK1Q9UJC3 728 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-223ENST00000520520 HTTP42858 3142 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 MANSC4A6NHS7 340 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 GOLGA8BA8MQT2 603 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 IGF2BP3O00425 579 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 APOBRQ0VD83 1088 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 TRDNQ13061 729 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 IER5LQ5T953 404 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 SYNE3Q6ZMZ3 975 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 CCDC129Q6ZRS4 1044 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 CREBRFQ8IUR6 639 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 LRRC8AQ8IWT6 810 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 PDCD7Q8N8D1 485 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 NCOA7Q8NI08 942 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 KIF18AQ8NI77 898 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 SDF4Q9BRK5 362 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 ELP3Q9H9T3 547 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 OGFRQ9NZT2 677 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 CEP126Q9P2H0 1117 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 MYH7P12883 1935 aa9.93□□□□□ -0.82
CTNNA1-223ENST00000520520 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 BRCA2P51587 3418 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 CCDC69A6NI79 296 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 ALDH1A1P00352 501 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 HSPD1P10809 573 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 PDIA3P30101 505 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 IREB2P48200 963 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 FAM193AP78312 1265 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 FOXO4P98177 505 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 GABPB1Q06547 395 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 CRHR2Q13324 411 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 TTF1Q15361 905 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 STOX1Q6ZVD7 989 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 OTOP1Q7RTM1 612 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 AOPEPQ8N6M6 819 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 ZNF397Q8NF99 534 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 APPBP2Q92624 585 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 ERO1AQ96HE7 468 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 ZBED3Q96IU2 234 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 PRMT6Q96LA8 375 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 TIGD1Q96MW7 591 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 OSBPL5Q9H0X9 879 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 CNNM1Q9NRU3 951 aa9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 COLQQ9Y215 455 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-223ENST00000520520 ECM29Q5VYK3 1845 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 A0A1B0GUL6 1792 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 TCP10L2B9ZVM9 353 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 KIF20AO95235 890 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 CSF1RP07333 972 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 SLC3A2P08195 630 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 SKILP12757 684 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 SFPQP23246 707 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 ADD1P35611 737 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 GJA5P36382 358 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms