RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 FAM13CQ8NE31 585 aa3.99□□□□□ -1.77
PABPC1-211ENST00000519596 DUSP9Q99956 384 aaKnown RBP3.99□□□□□ -1.77
PABPC1-211ENST00000519596 IRF2BPLQ9H1B7 796 aa3.99□□□□□ -1.77
PABPC1-211ENST00000519596 HPXP02790 462 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 ESR1P03372 595 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 BMP7P18075 431 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 GLDCP23378 1020 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 XPCQ01831 940 aaPredicted RBP3.98□□□□□ -1.77
PABPC1-211ENST00000519596 PSMD2Q13200 908 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 TAF1CQ15572 869 aaPredicted RBP3.98□□□□□ -1.77
PABPC1-211ENST00000519596 CLEC16AQ2KHT3 1053 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 TMEM132EQ6IEE7 984 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 PDZD8Q8NEN9 1154 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 CYB5D2Q8WUJ1 264 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 NOC4LQ9BVI4 516 aaKnown RBP3.98□□□□□ -1.77
PABPC1-211ENST00000519596 GPR62Q9BZJ7 368 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 ASCC2Q9H1I8 757 aaPredicted RBP3.98□□□□□ -1.77
PABPC1-211ENST00000519596 SLC6A17Q9H1V8 727 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 ADAMTS10Q9H324 1103 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 ZCCHC4Q9H5U6 513 aa3.98□□□□□ -1.77
PABPC1-211ENST00000519596 FITM1A5D6W6 292 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 SYN1P17600 705 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 TFE3P19532 575 aaPredicted RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 ST13P50502 369 aaKnown RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 ERVFC1P60507 584 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 NFKB2Q00653 900 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 CHRNEQ04844 493 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 DUSP4Q13115 394 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 MLECQ14165 292 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 CCDC84Q86UT8 332 aaPredicted RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 TSPYL5Q86VY4 417 aaPredicted RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 ACSF2Q96CM8 615 aaPredicted RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 FAM161BQ96MY7 647 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 PUS7Q96PZ0 661 aaKnown RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 CHMP4AQ9BY43 222 aa3.97□□□□□ -1.77
PABPC1-211ENST00000519596 DUSP15Q9H1R2 295 aaPredicted RBP3.97□□□□□ -1.77
PABPC1-211ENST00000519596 PDE6BP35913 854 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 PWP1Q13610 501 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 CCDC27Q2M243 656 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 MEI1Q5TIA1 1274 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 FBXO33Q7Z6M2 555 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 IRF2BP1Q8IU81 584 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 RELL1Q8IUW5 271 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 DTWD2Q8NBA8 298 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 DNAJB8Q8NHS0 232 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 RNF141Q8WVD5 230 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 CCDC74BQ96LY2 380 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 Q96M66 194 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 RNF32Q9H0A6 362 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 CWC22Q9HCG8 908 aaKnown RBP3.96□□□□□ -1.78
PABPC1-211ENST00000519596 PARP2Q9UGN5 583 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 TLR6Q9Y2C9 796 aa3.96□□□□□ -1.78
PABPC1-211ENST00000519596 SSU72P8A0A1W2PR75 194 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 WASH4PA8MWX3 477 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 UPK3BL1B0FP48 263 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 UPK3BL2E5RIL1 263 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 SRFP11831 508 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 GBP1P32455 592 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 TRHRP34981 398 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-211ENST00000519596 NFIXQ14938 502 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 SNX17Q15036 470 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 SKOR2Q2VWA4 1001 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-211ENST00000519596 GAB4Q2WGN9 574 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 TMEM201Q5SNT2 666 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 PHACTR4Q8IZ21 702 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 ANKS4BQ8N8V4 417 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 KCNC2Q96PR1 638 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 ASPNQ9BXN1 380 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 TMPRSS5Q9H3S3 457 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 C19orf44Q9H6X5 657 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 MRS2Q9HD23 443 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 KLHL3Q9UH77 587 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 GPR160Q9UJ42 338 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 PCDHA11Q9Y5I1 949 aa3.95□□□□□ -1.78
PABPC1-211ENST00000519596 IGSF3O75054 1194 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 SEMA7AO75326 666 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 ZGLP1P0C6A0 271 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 GBP2P32456 591 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-211ENST00000519596 DAB2P98082 770 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 LMNB2Q03252 620 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 KRTAP1-1Q07627 177 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 NR0B2Q15466 257 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 PRRT2Q7Z6L0 340 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-211ENST00000519596 ZNF605Q86T29 641 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 SLFN12Q8IYM2 578 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 PHC3Q8NDX5 983 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 UBE2Q2Q8WVN8 375 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 GATAD2BQ8WXI9 593 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 CORINQ9Y5Q5 1042 aa3.94□□□□□ -1.78
PABPC1-211ENST00000519596 USP31Q70CQ4 1352 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 RBAK-RBAKDNI3L0D1 243 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 RFXAPO00287 272 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 PSPNO60542 156 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 PEX10O60683 326 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 CILPO75339 1184 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 CTSHP09668 335 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 RNF4P78317 190 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 CAMK2GQ13555 558 aaPredicted RBP3.93□□□□□ -1.78
PABPC1-211ENST00000519596 SLC14A2Q15849 920 aa3.93□□□□□ -1.78
PABPC1-211ENST00000519596 ZNF385BQ569K4 471 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms