RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 Q96M66 194 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.43□□□□□ -1.064e-12■■□□□ 12.1
SQLE-203ENST00000518931 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 SNX11Q9Y5W9 270 aa8.43□□□□□ -1.06
SQLE-203ENST00000518931 ADAMTS4O75173 837 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 CLEC3AO75596 197 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 SSBP05455 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
SQLE-203ENST00000518931 GUCY2CP25092 1073 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 PRKCQQ04759 706 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 AOC3Q16853 763 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
SQLE-203ENST00000518931 VWCEQ96DN2 955 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 FBXL18Q96ME1 805 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 HSPA12BQ96MM6 686 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 VAV3Q9UKW4 847 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
SQLE-203ENST00000518931 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 WNT11O96014 354 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 PRNPP04156 253 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 PPP2R5EQ16537 467 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 NBPF12Q5TAG4 269 aaPredicted RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 OR6P1Q8NGX9 317 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 BCL7CQ8WUZ0 217 aaPredicted RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 HRASLS5Q96KN8 279 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 SLC6A18Q96N87 628 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 ASPNQ9BXN1 380 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 KCNH3Q9ULD8 1083 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
SQLE-203ENST00000518931 SLC5A6Q9Y289 635 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 ST14Q9Y5Y6 855 aa8.41□□□□□ -1.06
SQLE-203ENST00000518931 H3BS24 57 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 CLCN7P51798 805 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 Q8N3U1 123 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 DTWD2Q8NBA8 298 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 PIWIL2Q8TC59 973 aaKnown RBP8.4□□□□□ -1.06
SQLE-203ENST00000518931 DHRS1Q96LJ7 313 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 GMLQ99445 158 aa8.4□□□□□ -1.06
SQLE-203ENST00000518931 FGRP09769 529 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 CD96P40200 585 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 RNF4P78317 190 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 SPRED2Q7Z698 418 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 TTC6Q86TZ1 520 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 VSIG10LQ86VR7 867 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 STK11IPQ8N1F8 1099 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 FAM169BQ8N8A8 192 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 ASB11Q8WXH4 323 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 UBE2FQ969M7 185 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 SEMA3GQ9NS98 782 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
SQLE-203ENST00000518931 BCCIPQ9P287 314 aaKnown RBP eCLIP8.39□□□□□ -1.07
SQLE-203ENST00000518931 A0A1W2PQH9 124 aa8.38□□□□□ -1.07
SQLE-203ENST00000518931 ETFBP38117 255 aa8.38□□□□□ -1.07
SQLE-203ENST00000518931 FLCNQ8NFG4 579 aa8.38□□□□□ -1.07
SQLE-203ENST00000518931 SUCOQ9UBS9 1254 aaKnown RBP8.38□□□□□ -1.07
SQLE-203ENST00000518931 LTBP3Q9NS15 1303 aa8.37□□□□□ -1.07
SQLE-203ENST00000518931 CD8BP10966 210 aa8.37□□□□□ -1.07
SQLE-203ENST00000518931 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
SQLE-203ENST00000518931 ZNF574Q6ZN55 896 aaPredicted RBP8.37□□□□□ -1.07
SQLE-203ENST00000518931 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
SQLE-203ENST00000518931 MKRN2Q9H000 416 aaKnown RBP8.37□□□□□ -1.07
SQLE-203ENST00000518931 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
SQLE-203ENST00000518931 PITPNM2Q9BZ72 1349 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 C9IYK1 514 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 PMS1P54277 932 aaKnown RBP8.36□□□□□ -1.07
SQLE-203ENST00000518931 CASP7P55210 303 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 NFXL1Q6ZNB6 911 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 NBPF11Q86T75 865 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 C19orf47Q8N9M1 422 aaKnown RBP8.36□□□□□ -1.07
SQLE-203ENST00000518931 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
SQLE-203ENST00000518931 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 TP53P04637 393 aaPredicted RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 TDRD10Q5VZ19 366 aaKnown RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 THAP5Q7Z6K1 395 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 PAK6Q9NQU5 681 aaPredicted RBP8.35□□□□□ -1.07
SQLE-203ENST00000518931 FAM86C1Q9NVL1 165 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 GPATCH2Q9NW75 528 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 FBXL21Q9UKT6 434 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
SQLE-203ENST00000518931 SRFP11831 508 aa8.34□□□□□ -1.07
SQLE-203ENST00000518931 TPP2P29144 1249 aaPredicted RBP8.34□□□□□ -1.07
SQLE-203ENST00000518931 IKZF1Q13422 519 aa8.34□□□□□ -1.07
SQLE-203ENST00000518931 SNW1Q13573 536 aaKnown RBP8.34□□□□□ -1.07
SQLE-203ENST00000518931 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
SQLE-203ENST00000518931 CLEC16AQ2KHT3 1053 aa8.34□□□□□ -1.07
SQLE-203ENST00000518931 PPFIBP1Q86W92 1011 aa8.34□□□□□ -1.07
SQLE-203ENST00000518931 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms