RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 CHST3Q7LGC8 479 aa28.5■■■□□ 2.15
PCM1-209ENST00000518930 DGKHQ86XP1 1220 aa28.5■■■□□ 2.15
PCM1-209ENST00000518930 MKL1Q969V6 931 aa28.5■■■□□ 2.15
PCM1-209ENST00000518930 C12orf42Q96LP6 360 aa28.5■■■□□ 2.15
PCM1-209ENST00000518930 VCPKMTQ9H867 229 aa28.5■■■□□ 2.15
PCM1-209ENST00000518930 TOP1P11387 765 aaKnown RBP28.49■■■□□ 2.15
PCM1-209ENST00000518930 TM4SF4P48230 202 aa28.49■■■□□ 2.15
PCM1-209ENST00000518930 NOVP48745 357 aa28.49■■■□□ 2.15
PCM1-209ENST00000518930 ENAHQ8N8S7 591 aaPredicted RBP28.49■■■□□ 2.15
PCM1-209ENST00000518930 LPAR1Q92633 364 aa28.49■■■□□ 2.15
PCM1-209ENST00000518930 EMILIN3Q9NT22 766 aa28.49■■■□□ 2.15
PCM1-209ENST00000518930 AGTPBP1Q9UPW5 1226 aa28.49■■■□□ 2.15
PCM1-209ENST00000518930 CASTP20810 708 aaKnown RBP28.48■■■□□ 2.15
PCM1-209ENST00000518930 ANTXR2P58335 489 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 PABPC4Q13310 644 aaKnown RBP eCLIP28.48■■■□□ 2.15
PCM1-209ENST00000518930 MOGSQ13724 837 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 IFIT1BQ5T764 474 aaKnown RBP28.48■■■□□ 2.15
PCM1-209ENST00000518930 BLOC1S2Q6QNY1 142 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 IFNL1Q8IU54 200 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 MTA3Q9BTC8 594 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 BACH2Q9BYV9 841 aa28.48■■■□□ 2.15
PCM1-209ENST00000518930 WDR19Q8NEZ3 1342 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 BTBD19C9JJ37 291 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 WTAPQ15007 396 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 TMEM67Q5HYA8 995 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 DHX32Q7L7V1 743 aaKnown RBP28.47■■■□□ 2.15
PCM1-209ENST00000518930 ANKRD23Q86SG2 305 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 GMCL1P1Q8NEA9 526 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 TMEM87BQ96K49 555 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 TMEM47Q9BQJ4 181 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 KAT14Q9H8E8 782 aa28.47■■■□□ 2.15
PCM1-209ENST00000518930 CEP350Q5VT06 3117 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 IGF2BP3O00425 579 aaKnown RBP eCLIP28.46■■■□□ 2.15
PCM1-209ENST00000518930 VCAM1P19320 739 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 MAP2K1Q02750 393 aaPredicted RBP28.46■■■□□ 2.15
PCM1-209ENST00000518930 RCSD1Q6JBY9 416 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 SPICE1Q8N0Z3 855 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 PTPN18Q99952 460 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 C22orf23Q9BZE7 217 aa28.46■■■□□ 2.15
PCM1-209ENST00000518930 ZCCHC17Q9NP64 241 aaKnown RBP28.46■■■□□ 2.15
PCM1-209ENST00000518930 F5H6K3 240 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 ALDH1A1P00352 501 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 KLRC3Q07444 240 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 TREML2Q5T2D2 321 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 FAM43AQ8N2R8 423 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 ANKS1AQ92625 1134 aa28.45■■■□□ 2.14
PCM1-209ENST00000518930 PDHXO00330 501 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 WDR46O15213 610 aaKnown RBP28.44■■■□□ 2.14
PCM1-209ENST00000518930 NDUFB10O96000 172 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 SEC23AQ15436 765 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 GPAT2Q6NUI2 795 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 BEGAINQ9BUH8 593 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 TM6SF1Q9BZW5 370 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 PNMA3Q9UL41 463 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 SLC45A1Q9Y2W3 748 aa28.44■■■□□ 2.14
PCM1-209ENST00000518930 RPS6KB1P23443 525 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 FGD1P98174 961 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 COL9A3Q14050 684 aaPredicted RBP28.43■■■□□ 2.14
PCM1-209ENST00000518930 SLFN13Q68D06 897 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 PNMA1Q8ND90 353 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 TANGO6Q9C0B7 1094 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 RPAP3Q9H6T3 665 aaPredicted RBP28.43■■■□□ 2.14
PCM1-209ENST00000518930 ISY1Q9ULR0 285 aaKnown RBP28.43■■■□□ 2.14
PCM1-209ENST00000518930 MTMR7Q9Y216 660 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 CYP46A1Q9Y6A2 500 aa28.43■■■□□ 2.14
PCM1-209ENST00000518930 SH2B2O14492 632 aaPredicted RBP28.42■■■□□ 2.14
PCM1-209ENST00000518930 OSBPP22059 807 aa28.42■■■□□ 2.14
PCM1-209ENST00000518930 IRX3P78415 501 aaPredicted RBP28.42■■■□□ 2.14
PCM1-209ENST00000518930 KIAA1755Q5JYT7 1200 aa28.42■■■□□ 2.14
PCM1-209ENST00000518930 IGDCC4Q8TDY8 1250 aa28.42■■■□□ 2.14
PCM1-209ENST00000518930 TCEANC2Q96MN5 208 aa28.42■■■□□ 2.14
PCM1-209ENST00000518930 LRRC2Q9BYS8 371 aa28.42■■■□□ 2.14
PCM1-209ENST00000518930 USP17L15C9J2P7 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L13C9JLJ4 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L11C9JVI0 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L18D6R9N7 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L22D6RA61 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L17D6RBQ6 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L19D6RCP7 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L20D6RJB6 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 CPA1P15085 419 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 EXOSC10Q01780 885 aaKnown RBP28.41■■■□□ 2.14
PCM1-209ENST00000518930 USP17L24Q0WX57 530 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 TAF1CQ15572 869 aaPredicted RBP28.41■■■□□ 2.14
PCM1-209ENST00000518930 NFXL1Q6ZNB6 911 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 RUFY3Q7L099 469 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 TMTC2Q8N394 836 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 GMCL1Q96IK5 515 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 PARK7Q99497 189 aaKnown RBP28.41■■■□□ 2.14
PCM1-209ENST00000518930 LY9Q9HBG7 655 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 ZSWIM6Q9HCJ5 1215 aa28.41■■■□□ 2.14
PCM1-209ENST00000518930 CCDC69A6NI79 296 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 HOXA7P31268 230 aaPredicted RBP28.4■■■□□ 2.14
PCM1-209ENST00000518930 SLC1A4P43007 532 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 RBM25P49756 843 aaKnown RBP28.4■■■□□ 2.14
PCM1-209ENST00000518930 FAM83BQ5T0W9 1011 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 JMYQ8N9B5 988 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 DCAF4Q8WV16 495 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 IL17RAQ96F46 866 aa28.4■■■□□ 2.14
PCM1-209ENST00000518930 LIFRP42702 1097 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms