RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 OPTNQ96CV9 577 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 ZNF274Q96GC6 653 aaPredicted RBP11.1□□□□□ -0.63
CLN8-203ENST00000518780 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 FEZ1Q99689 392 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
CLN8-203ENST00000518780 SIPA1L1O43166 1804 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 MANSC4A6NHS7 340 aaPredicted RBP11.09□□□□□ -0.63
CLN8-203ENST00000518780 F5H6K3 240 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 IRF6O14896 467 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 NMT2O60551 498 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 DDAH1O94760 285 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 CETPP11597 493 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 ECE1P42892 770 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 KLRC3Q07444 240 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 DEFB115Q30KQ5 88 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
CLN8-203ENST00000518780 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 ZSCAN31Q96LW9 406 aaPredicted RBP11.09□□□□□ -0.63
CLN8-203ENST00000518780 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 TMOD4Q9NZQ9 345 aa11.09□□□□□ -0.63
CLN8-203ENST00000518780 A0A0G2JLL6 359 aaPredicted RBP11.08□□□□□ -0.64
CLN8-203ENST00000518780 CCDC196A0A1B0GTZ2 297 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 SLC10A3P09131 477 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 SNHG28P0DPA3 235 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 KIF5BP33176 963 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 GNAQP50148 359 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 C1QTNF8P60827 252 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 NOGQ13253 232 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 PABPC4Q13310 644 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLN8-203ENST00000518780 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
CLN8-203ENST00000518780 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
CLN8-203ENST00000518780 PRRT2Q7Z6L0 340 aaPredicted RBP11.08□□□□□ -0.64
CLN8-203ENST00000518780 ACER1Q8TDN7 264 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 DCAF4Q8WV16 495 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 BRF1Q92994 677 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 ZCCHC17Q9NP64 241 aaKnown RBP11.08□□□□□ -0.64
CLN8-203ENST00000518780 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 SLC45A1Q9Y2W3 748 aa11.08□□□□□ -0.64
CLN8-203ENST00000518780 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 WDR46O15213 610 aaKnown RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 ZBTB43O43298 467 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 DHX16O60231 1041 aaKnown RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 PLA2G6O60733 806 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 CPA1P15085 419 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 HSPA6P17066 643 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 SMARCA1P28370 1054 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 SLC1A4P43007 532 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 AK2P54819 239 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 TROAPQ12815 778 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 MTMR2Q13614 643 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 ASPRV1Q53RT3 343 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 SLFN13Q68D06 897 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 APOA5Q6Q788 366 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 RASAL3Q86YV0 1011 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 SNX21Q969T3 373 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 SH2B1Q9NRF2 756 aaPredicted RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CLN8-203ENST00000518780 RBM28Q9NW13 759 aaKnown RBP11.07□□□□□ -0.64
CLN8-203ENST00000518780 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 NDUFB10O96000 172 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 FDX1P10109 184 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 PDHBP11177 359 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 BMP3P12645 472 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
CLN8-203ENST00000518780 MAP2K2P36507 400 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 SREBF2Q12772 1141 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 COL9A3Q14050 684 aaPredicted RBP11.06□□□□□ -0.64
CLN8-203ENST00000518780 OTUD7BQ6GQQ9 843 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 CLEC10AQ8IUN9 316 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 TCEANC2Q96MN5 208 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 LRRC2Q9BYS8 371 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 FEM1BQ9UK73 627 aa11.06□□□□□ -0.64
CLN8-203ENST00000518780 NID2Q14112 1375 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 FAM155AB1AL88 458 aaPredicted RBP11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L15C9J2P7 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L13C9JLJ4 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L11C9JVI0 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L18D6R9N7 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L22D6RA61 530 aa11.05□□□□□ -0.64
CLN8-203ENST00000518780 USP17L17D6RBQ6 530 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms